Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01226

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,349,140	+		MIT1002_01224	0.34	-0.9
1,349,169	+		MIT1002_01224	0.41	-1.3
1,349,177	-		MIT1002_01224	0.42	-0.4
1,349,177	-		MIT1002_01224	0.42	+0.8
1,349,177	-		MIT1002_01224	0.42	+1.7
1,349,177	-		MIT1002_01224	0.42	+0.1
1,349,258	-		MIT1002_01224	0.60	-0.6
1,349,327	-		MIT1002_01224	0.75	-0.7
1,349,366	+		MIT1002_01224	0.84	-1.1
1,349,376	-		MIT1002_01224	0.86	+0.9
1,349,427	-				+0.7
1,349,439	+				+1.3
1,349,447	-				+1.2
1,349,447	-				+0.1
1,349,447	-				+1.4
1,349,449	+				+1.6
1,349,494	+				+1.1
1,349,494	+				+0.1
1,349,502	-				-0.5
1,349,502	-				+0.3
1,349,522	-				-2.1
1,349,604	-		MIT1002_01225	0.16	+0.6
1,349,616	-		MIT1002_01225	0.19	-0.1
1,349,729	+		MIT1002_01225	0.46	+0.7
1,349,754	-		MIT1002_01225	0.52	+2.3
1,349,836	-		MIT1002_01225	0.72	-0.3
1,349,886	+		MIT1002_01225	0.84	-1.8
1,350,018	-				+0.6
1,350,018	-				+1.0
1,350,050	-				-1.4
1,350,183	-		MIT1002_01226	0.41	+0.2
1,350,188	-		MIT1002_01226	0.45	+0.5
1,350,227	+		MIT1002_01226	0.76	+1.4
1,350,235	-		MIT1002_01226	0.83	+0.3
1,350,245	-				+1.6
1,350,263	+				+0.3
1,350,273	+				-0.4
1,350,385	+		MIT1002_01227	0.15	+0.8
1,350,424	+		MIT1002_01227	0.21	+0.8
1,350,427	-		MIT1002_01227	0.22	+2.3
1,350,449	-		MIT1002_01227	0.25	-2.8
1,350,465	+		MIT1002_01227	0.27	-0.5
1,350,519	+		MIT1002_01227	0.36	+0.5
1,350,528	-		MIT1002_01227	0.37	-1.6
1,350,528	-		MIT1002_01227	0.37	-0.5
1,350,649	-		MIT1002_01227	0.56	-0.1
1,350,649	-		MIT1002_01227	0.56	+0.1
1,350,661	+		MIT1002_01227	0.58	+0.1
1,350,755	+		MIT1002_01227	0.72	+0.5
1,350,763	-		MIT1002_01227	0.73	-0.9
1,350,773	-		MIT1002_01227	0.75	+0.3
1,350,784	+		MIT1002_01227	0.76	+1.0
1,350,784	+		MIT1002_01227	0.76	-0.0
1,350,909	-				-0.5
1,350,916	-				-0.7
1,350,950	+				+0.9
1,351,023	-				-2.7