Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01220

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,341,613	-				-1.1
1,341,624	-				-1.4
1,341,662	-				-1.1
1,341,763	-		MIT1002_01218	0.48	-2.6
1,341,789	+				-0.3
1,341,833	-				+0.8
1,341,886	-		MIT1002_01219	0.14	+2.0
1,341,888	-		MIT1002_01219	0.14	-0.3
1,341,923	+		MIT1002_01219	0.19	-0.1
1,341,932	-		MIT1002_01219	0.20	-0.2
1,341,955	+		MIT1002_01219	0.23	-0.1
1,341,963	-		MIT1002_01219	0.24	-0.7
1,341,979	-		MIT1002_01219	0.27	+0.3
1,342,074	-		MIT1002_01219	0.39	-0.2
1,342,222	+		MIT1002_01219	0.59	+1.4
1,342,277	+		MIT1002_01219	0.66	+0.4
1,342,300	+		MIT1002_01219	0.69	-0.1
1,342,308	-		MIT1002_01219	0.70	-1.6
1,342,332	-		MIT1002_01219	0.73	-0.1
1,342,498	-				-1.1
1,342,603	+		MIT1002_01220	0.13	-0.2
1,342,617	+		MIT1002_01220	0.15	-0.4
1,342,617	+		MIT1002_01220	0.15	-2.5
1,342,643	+		MIT1002_01220	0.20	-0.5
1,342,656	-		MIT1002_01220	0.22	+0.6
1,342,728	+		MIT1002_01220	0.35	-1.6
1,342,728	+		MIT1002_01220	0.35	+0.3
1,342,757	-		MIT1002_01220	0.40	-0.6
1,342,857	+		MIT1002_01220	0.57	+1.6
1,342,876	+		MIT1002_01220	0.61	+2.3
1,342,890	+		MIT1002_01220	0.63	-0.1
1,342,911	+		MIT1002_01220	0.67	+1.2
1,342,921	+		MIT1002_01220	0.69	+0.7
1,342,921	+		MIT1002_01220	0.69	+1.0
1,342,939	-		MIT1002_01220	0.72	+2.1
1,342,939	-		MIT1002_01220	0.72	+2.1
1,342,993	+		MIT1002_01220	0.81	+1.5
1,343,203	-				+1.1
1,343,226	-				-1.3
1,343,234	-				+0.6
1,343,296	-				+1.2
1,343,298	+				+0.0
1,343,342	-				+3.2
1,343,365	+				-1.6
1,343,367	+				-0.4
1,343,370	-				+1.0
1,343,370	-				+0.3
1,343,554	+				-2.3
1,343,573	-				+0.4
1,343,633	+				+0.1
1,343,654	-				+0.9
1,343,665	+				-2.6
1,343,693	+				+0.4
1,343,800	-		MIT1002_01221	0.13	-1.1
1,343,884	-		MIT1002_01221	0.16	-0.4
1,343,980	+		MIT1002_01221	0.19	-0.1
1,343,988	-		MIT1002_01221	0.19	-0.9
1,343,988	-		MIT1002_01221	0.19	+1.3
1,343,988	-		MIT1002_01221	0.19	-0.8
1,344,021	+		MIT1002_01221	0.20	-2.9
1,344,058	-		MIT1002_01221	0.22	-2.4
1,344,068	+		MIT1002_01221	0.22	-0.4
1,344,086	-		MIT1002_01221	0.23	+0.4