Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01207

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,329,663	-		MIT1002_01206	0.15	+0.0
1,329,781	+		MIT1002_01206	0.26	+0.4
1,329,781	+		MIT1002_01206	0.26	-0.4
1,329,781	+		MIT1002_01206	0.26	+0.6
1,329,817	-		MIT1002_01206	0.30	-0.5
1,329,819	+		MIT1002_01206	0.30	-2.4
1,329,859	+		MIT1002_01206	0.34	+1.7
1,330,043	+		MIT1002_01206	0.51	-1.2
1,330,043	+		MIT1002_01206	0.51	+1.7
1,330,051	-		MIT1002_01206	0.52	+0.2
1,330,080	-		MIT1002_01206	0.55	+0.2
1,330,127	+		MIT1002_01206	0.59	+0.6
1,330,174	-		MIT1002_01206	0.63	-2.4
1,330,262	+		MIT1002_01206	0.72	+0.0
1,330,275	+		MIT1002_01206	0.73	-1.4
1,330,358	+		MIT1002_01206	0.81	-0.4
1,330,358	+		MIT1002_01206	0.81	-1.0
1,330,366	-		MIT1002_01206	0.82	+0.3
1,330,371	-		MIT1002_01206	0.82	+0.1
1,330,435	+		MIT1002_01206	0.88	+1.5
1,330,445	+		MIT1002_01206	0.89	+2.1
1,330,453	-				+0.5
1,330,461	-				-0.8
1,330,469	-				-0.3
1,330,475	+				+1.6
1,330,481	+				-1.5
1,330,481	+				+0.1
1,330,522	-				+0.2
1,330,558	+				-0.0
1,330,639	-				-0.2
1,330,703	+		MIT1002_01207	0.17	+1.4
1,330,734	-		MIT1002_01207	0.25	-0.4
1,330,960	+		MIT1002_01207	0.84	-1.3
1,330,982	-		MIT1002_01207	0.89	+2.3
1,330,988	+				+0.6
1,331,037	+				+0.3
1,331,141	-				+0.0
1,331,164	+				+1.3
1,331,225	-				+0.8
1,331,298	-				-0.7
1,331,306	-				+1.1
1,331,306	-				+1.6
1,331,327	-				-1.3
1,331,341	+				+0.4
1,331,349	-		MIT1002_01208	0.11	-0.6
1,331,428	+		MIT1002_01208	0.19	+0.9
1,331,428	+		MIT1002_01208	0.19	+0.1
1,331,428	+		MIT1002_01208	0.19	+1.1
1,331,436	-		MIT1002_01208	0.20	+0.7
1,331,451	+		MIT1002_01208	0.22	+0.1
1,331,482	+		MIT1002_01208	0.25	-0.3
1,331,491	+		MIT1002_01208	0.26	-0.5
1,331,491	+		MIT1002_01208	0.26	-0.9
1,331,499	-		MIT1002_01208	0.27	+0.1
1,331,499	-		MIT1002_01208	0.27	+0.9
1,331,541	-		MIT1002_01208	0.32	-0.0
1,331,546	-		MIT1002_01208	0.32	+2.1
1,331,551	-		MIT1002_01208	0.33	-1.0
1,331,556	-		MIT1002_01208	0.33	+0.3
1,331,611	+		MIT1002_01208	0.39	-1.7
1,331,616	+		MIT1002_01208	0.40	+0.9
1,331,617	+		MIT1002_01208	0.40	+2.1
1,331,624	-		MIT1002_01208	0.41	+1.2
1,331,624	-		MIT1002_01208	0.41	+0.7
1,331,625	-		MIT1002_01208	0.41	+0.9
1,331,625	-		MIT1002_01208	0.41	-0.2
1,331,792	-		MIT1002_01208	0.59	+0.1
1,331,893	+		MIT1002_01208	0.70	+0.9
1,331,937	+		MIT1002_01208	0.75	-2.5
1,331,977	+		MIT1002_01208	0.79	+1.0
1,331,987	+		MIT1002_01208	0.80	+0.8