Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01154

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,264,146	+		MIT1002_01151	0.79	-0.1
1,264,282	+				-0.2
1,264,347	-				+1.7
1,264,728	+		MIT1002_01153	0.57	+0.1
1,264,738	+		MIT1002_01153	0.61	+0.6
1,264,755	+		MIT1002_01153	0.67	-2.1
1,264,755	+		MIT1002_01153	0.67	+0.5
1,264,778	+		MIT1002_01153	0.75	-0.2
1,265,130	-				+0.8
1,265,138	+				+2.8
1,265,154	+				+1.6
1,265,311	+		MIT1002_01154	0.21	+1.5
1,265,311	+		MIT1002_01154	0.21	+1.1
1,265,311	+		MIT1002_01154	0.21	+0.4
1,265,319	+		MIT1002_01154	0.21	+2.3
1,265,378	+		MIT1002_01154	0.27	+1.2
1,265,440	-		MIT1002_01154	0.33	+1.9
1,265,449	+		MIT1002_01154	0.33	+1.2
1,265,456	+		MIT1002_01154	0.34	-1.1
1,265,464	-		MIT1002_01154	0.35	+0.5
1,265,527	+		MIT1002_01154	0.41	+2.0
1,265,541	+		MIT1002_01154	0.42	+1.4
1,265,546	+		MIT1002_01154	0.42	+0.8
1,265,734	-		MIT1002_01154	0.60	+0.5
1,265,788	-		MIT1002_01154	0.65	+0.6
1,265,824	-		MIT1002_01154	0.68	+1.5
1,265,858	+		MIT1002_01154	0.71	-2.0
1,265,877	+		MIT1002_01154	0.73	+0.3
1,265,879	+		MIT1002_01154	0.73	-0.8
1,265,884	+		MIT1002_01154	0.73	-0.6
1,265,892	-		MIT1002_01154	0.74	+1.0
1,265,892	-		MIT1002_01154	0.74	+1.5
1,265,941	-		MIT1002_01154	0.79	+1.1
1,266,049	+		MIT1002_01154	0.89	+0.8
1,266,105	-				+1.0
1,266,417	+				-0.1
1,266,542	+				+0.8
1,266,542	+				-0.7
1,266,549	-				+0.3
1,266,585	+				+0.7
1,266,585	+				+0.2
1,266,633	+				+0.7
1,266,757	+				+1.1
1,266,868	+		MIT1002_01155	0.14	-0.8
1,266,875	+		MIT1002_01155	0.14	+0.9
1,266,875	+		MIT1002_01155	0.14	-1.1
1,266,875	+		MIT1002_01155	0.14	-1.2
1,266,875	+		MIT1002_01155	0.14	+0.5
1,266,881	-		MIT1002_01155	0.14	+0.9
1,266,883	-		MIT1002_01155	0.14	+2.7
1,266,883	-		MIT1002_01155	0.14	+0.1
1,266,883	-		MIT1002_01155	0.14	+0.7
1,266,990	-		MIT1002_01155	0.18	+0.6
1,267,000	+		MIT1002_01155	0.18	-1.2
1,267,036	+		MIT1002_01155	0.19	-1.5
1,267,044	-		MIT1002_01155	0.20	+0.8
1,267,044	-		MIT1002_01155	0.20	-0.3