Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01095

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,202,540	-				-2.3
1,202,616	+				+1.6
1,202,621	+				-0.8
1,202,624	-				+1.1
1,202,624	-				+0.1
1,202,624	-				-0.4
1,202,626	-				+0.2
1,202,635	+				-1.5
1,202,635	+				+1.4
1,202,677	-		MIT1002_01093	0.11	-0.9
1,202,692	-		MIT1002_01093	0.15	+0.3
1,202,695	+		MIT1002_01093	0.15	-0.8
1,202,703	-		MIT1002_01093	0.17	+0.6
1,202,797	+		MIT1002_01093	0.40	+0.3
1,202,868	-		MIT1002_01093	0.58	+2.3
1,202,887	-		MIT1002_01093	0.62	+0.1
1,202,898	-		MIT1002_01093	0.65	-1.7
1,203,190	+		MIT1002_01094	0.27	+0.0
1,203,198	-		MIT1002_01094	0.29	-0.4
1,203,198	-		MIT1002_01094	0.29	-0.4
1,203,198	-		MIT1002_01094	0.29	-1.4
1,203,198	-		MIT1002_01094	0.29	-0.0
1,203,207	+		MIT1002_01094	0.31	+0.3
1,203,255	+		MIT1002_01094	0.41	+0.6
1,203,308	-		MIT1002_01094	0.53	+1.0
1,203,386	+		MIT1002_01094	0.70	+0.6
1,203,574	+				+1.2
1,203,611	-		MIT1002_01095	0.13	+0.6
1,203,645	-		MIT1002_01095	0.17	+0.2
1,203,665	-		MIT1002_01095	0.20	+1.3
1,203,676	+		MIT1002_01095	0.22	+0.3
1,203,676	+		MIT1002_01095	0.22	+0.9
1,203,731	-		MIT1002_01095	0.29	-0.4
1,203,856	+		MIT1002_01095	0.45	+0.4
1,203,858	+		MIT1002_01095	0.46	-0.1
1,203,866	-		MIT1002_01095	0.47	-2.9
1,203,866	-		MIT1002_01095	0.47	+1.2
1,203,897	-		MIT1002_01095	0.51	+0.2
1,203,906	-		MIT1002_01095	0.52	+0.6
1,203,906	-		MIT1002_01095	0.52	+0.1
1,203,906	-		MIT1002_01095	0.52	+1.2
1,203,916	-		MIT1002_01095	0.53	-0.5
1,203,959	-		MIT1002_01095	0.59	+0.2
1,203,967	+		MIT1002_01095	0.60	+3.0
1,204,058	+		MIT1002_01095	0.72	-0.2
1,204,066	-		MIT1002_01095	0.73	+0.7
1,204,164	+		MIT1002_01095	0.86	+0.2
1,204,178	-		MIT1002_01095	0.88	+0.9
1,204,249	+				+0.1
1,204,271	+				+0.6
1,204,321	-		MIT1002_01096	0.16	-1.8
1,204,333	+		MIT1002_01096	0.21	-1.0
1,204,371	+		MIT1002_01096	0.35	+0.0
1,204,371	+		MIT1002_01096	0.35	+0.5
1,204,379	-		MIT1002_01096	0.38	-1.0
1,204,493	+		MIT1002_01096	0.80	+0.9
1,204,549	+				+0.1
1,204,549	+				-1.1
1,204,678	+		MIT1002_01097	0.15	-1.6
1,204,678	+		MIT1002_01097	0.15	-0.7
1,204,703	-		MIT1002_01097	0.18	-1.8
1,204,728	-		MIT1002_01097	0.22	-1.5
1,204,732	+		MIT1002_01097	0.22	-2.4
1,204,800	+		MIT1002_01097	0.31	+0.6
1,204,861	-		MIT1002_01097	0.39	-1.3
1,204,866	-		MIT1002_01097	0.39	-0.3
1,204,877	+		MIT1002_01097	0.41	-0.6
1,204,877	+		MIT1002_01097	0.41	-1.4
1,204,885	-		MIT1002_01097	0.42	-1.7
1,204,885	-		MIT1002_01097	0.42	+0.2
1,204,885	-		MIT1002_01097	0.42	-0.8
1,204,914	+		MIT1002_01097	0.46	-2.9
1,204,914	+		MIT1002_01097	0.46	+0.8
1,204,914	+		MIT1002_01097	0.46	-0.7
1,204,914	+		MIT1002_01097	0.46	+0.7
1,204,922	-		MIT1002_01097	0.47	-2.3
1,204,922	-		MIT1002_01097	0.47	-0.8
1,204,922	-		MIT1002_01097	0.47	-0.9
1,204,922	-		MIT1002_01097	0.47	-0.6
1,205,017	-		MIT1002_01097	0.59	-0.1
1,205,024	-		MIT1002_01097	0.60	-2.9
1,205,042	+		MIT1002_01097	0.62	-0.7
1,205,050	-		MIT1002_01097	0.63	-0.2
1,205,052	+		MIT1002_01097	0.63	-1.4
1,205,063	-		MIT1002_01097	0.65	-1.6
1,205,078	-		MIT1002_01097	0.67	-0.4
1,205,082	+		MIT1002_01097	0.67	-2.8
1,205,113	+		MIT1002_01097	0.71	-1.8
1,205,113	-		MIT1002_01097	0.71	-2.0
1,205,144	+		MIT1002_01097	0.75	-0.3
1,205,159	-		MIT1002_01097	0.77	+0.4
1,205,178	-		MIT1002_01097	0.79	-3.4
1,205,178	-		MIT1002_01097	0.79	-1.5
1,205,178	-		MIT1002_01097	0.79	-1.3
1,205,224	+		MIT1002_01097	0.85	-1.3