Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01091

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,200,011	+		MIT1002_01090	0.68	-0.8
1,200,055	+		MIT1002_01090	0.69	+0.6
1,200,055	+		MIT1002_01090	0.69	+0.7
1,200,063	-		MIT1002_01090	0.70	-0.1
1,200,063	-		MIT1002_01090	0.70	-1.4
1,200,118	+		MIT1002_01090	0.72	-0.2
1,200,126	-		MIT1002_01090	0.73	-0.7
1,200,126	-		MIT1002_01090	0.73	-1.8
1,200,126	-		MIT1002_01090	0.73	+0.0
1,200,156	+		MIT1002_01090	0.74	+0.2
1,200,240	-		MIT1002_01090	0.77	-0.3
1,200,240	-		MIT1002_01090	0.77	-1.5
1,200,453	-		MIT1002_01090	0.87	-0.3
1,200,471	+		MIT1002_01090	0.87	-0.3
1,200,560	-				-0.9
1,200,740	-				+0.1
1,200,757	-				+0.2
1,200,869	-				+0.3
1,200,900	+				-0.0
1,201,105	+		MIT1002_01091	0.21	+0.7
1,201,137	+		MIT1002_01091	0.27	+0.7
1,201,173	+		MIT1002_01091	0.34	+1.1
1,201,265	+		MIT1002_01091	0.51	-1.3
1,201,270	+		MIT1002_01091	0.52	-0.4
1,201,273	-		MIT1002_01091	0.53	-2.0
1,201,319	-		MIT1002_01091	0.61	+0.9
1,201,346	-		MIT1002_01091	0.66	-0.1
1,201,366	+		MIT1002_01091	0.70	-0.5
1,201,427	-		MIT1002_01091	0.81	+0.2
1,201,507	-				-1.0
1,201,544	+				-1.0
1,201,592	+				+0.4
1,201,592	+				-0.8
1,201,592	+				+0.3
1,201,602	+				+0.5
1,201,602	+				+1.8
1,201,602	+				-0.2
1,201,602	+				-1.5
1,201,610	-				-0.9
1,201,610	-				+0.4
1,201,689	-		MIT1002_01092	0.13	+0.2
1,201,698	+		MIT1002_01092	0.13	-0.2
1,201,707	-		MIT1002_01092	0.14	-0.7
1,201,739	+		MIT1002_01092	0.17	-1.8
1,201,768	+		MIT1002_01092	0.20	+1.1
1,201,887	-		MIT1002_01092	0.31	+0.1
1,201,897	+		MIT1002_01092	0.32	-0.7
1,201,902	+		MIT1002_01092	0.33	-0.5
1,202,007	+		MIT1002_01092	0.43	+2.9
1,202,015	-		MIT1002_01092	0.43	-0.6
1,202,061	-		MIT1002_01092	0.48	+0.3
1,202,109	-		MIT1002_01092	0.52	-0.7
1,202,124	+		MIT1002_01092	0.54	-0.2
1,202,219	-		MIT1002_01092	0.63	-0.7
1,202,239	+		MIT1002_01092	0.64	-0.8
1,202,317	+		MIT1002_01092	0.72	+0.5
1,202,325	-		MIT1002_01092	0.73	+1.5
1,202,380	+		MIT1002_01092	0.78	-0.1
1,202,380	+		MIT1002_01092	0.78	-0.3
1,202,388	-		MIT1002_01092	0.79	+1.7
1,202,448	-		MIT1002_01092	0.84	+0.0