Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01076

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,181,824	-		MIT1002_01074	0.54	-1.3
1,181,833	-		MIT1002_01074	0.55	-1.6
1,181,841	-		MIT1002_01074	0.56	-0.1
1,181,965	+		MIT1002_01074	0.74	-0.7
1,182,030	+		MIT1002_01074	0.83	-0.8
1,182,030	+		MIT1002_01074	0.83	+1.0
1,182,139	-				+0.6
1,182,203	+				+0.4
1,182,232	-				+0.1
1,182,371	-		MIT1002_01075	0.32	+1.5
1,182,376	-		MIT1002_01075	0.33	+0.4
1,182,388	+		MIT1002_01075	0.35	+0.7
1,182,396	-		MIT1002_01075	0.36	-0.8
1,182,396	-		MIT1002_01075	0.36	+0.3
1,182,411	+		MIT1002_01075	0.38	+1.6
1,182,443	-		MIT1002_01075	0.44	+0.0
1,182,445	+		MIT1002_01075	0.44	-0.4
1,182,618	+		MIT1002_01075	0.72	+0.9
1,182,626	+		MIT1002_01075	0.73	-0.1
1,182,647	-		MIT1002_01075	0.76	+0.5
1,182,701	-		MIT1002_01075	0.85	-0.2
1,182,720	+		MIT1002_01075	0.88	-0.4
1,182,720	+		MIT1002_01075	0.88	-2.0
1,182,728	-		MIT1002_01075	0.89	-0.2
1,182,798	+				+1.1
1,182,798	+				+2.0
1,182,806	-				+0.5
1,182,909	-		MIT1002_01076	0.12	+0.5
1,182,953	+		MIT1002_01076	0.16	+0.1
1,182,962	-		MIT1002_01076	0.17	+0.8
1,182,969	+		MIT1002_01076	0.17	+2.5
1,182,979	+		MIT1002_01076	0.18	-0.7
1,182,987	-		MIT1002_01076	0.19	-0.3
1,182,987	-		MIT1002_01076	0.19	+1.4
1,183,087	-		MIT1002_01076	0.29	+1.7
1,183,105	+		MIT1002_01076	0.31	+1.9
1,183,113	-		MIT1002_01076	0.31	+1.0
1,183,135	+		MIT1002_01076	0.33	-0.2
1,183,135	+		MIT1002_01076	0.33	+0.2
1,183,140	+		MIT1002_01076	0.34	+1.3
1,183,239	+		MIT1002_01076	0.43	+0.3
1,183,378	+		MIT1002_01076	0.57	-0.9
1,183,396	-		MIT1002_01076	0.59	+0.2
1,183,460	-		MIT1002_01076	0.65	-1.5
1,183,537	+		MIT1002_01076	0.72	+0.6
1,183,585	+		MIT1002_01076	0.77	+1.5
1,183,706	-		MIT1002_01076	0.88	-1.7
1,183,726	-				+1.4
1,183,752	-				+0.8
1,183,930	+				+0.5
1,183,937	+				+1.0
1,183,939	+				-0.0
1,183,939	-				+0.9
1,183,949	+				+0.3
1,183,957	-				+0.2
1,183,957	-				-0.2
1,183,995	-		MIT1002_01077	0.15	+0.4
1,184,071	-		MIT1002_01077	0.26	-1.3
1,184,074	+		MIT1002_01077	0.26	+0.5
1,184,132	+		MIT1002_01077	0.35	+0.7
1,184,137	+		MIT1002_01077	0.36	+1.3
1,184,147	-		MIT1002_01077	0.37	-0.8
1,184,203	-		MIT1002_01077	0.45	+0.4
1,184,226	+		MIT1002_01077	0.49	+0.5
1,184,231	+		MIT1002_01077	0.49	+0.3
1,184,234	-		MIT1002_01077	0.50	+0.1
1,184,257	+		MIT1002_01077	0.53	-1.0
1,184,260	-		MIT1002_01077	0.54	-0.4
1,184,272	-		MIT1002_01077	0.55	+0.4
1,184,342	-		MIT1002_01077	0.66	-1.1
1,184,349	+		MIT1002_01077	0.67	+0.6
1,184,351	+		MIT1002_01077	0.67	+0.5
1,184,359	-		MIT1002_01077	0.68	+0.4
1,184,359	-		MIT1002_01077	0.68	-1.4
1,184,394	+		MIT1002_01077	0.73	+0.5
1,184,394	+		MIT1002_01077	0.73	+0.4
1,184,394	+		MIT1002_01077	0.73	+0.5
1,184,402	-		MIT1002_01077	0.74	+1.4
1,184,613	+				-2.4
1,184,618	+				-0.6
1,184,693	-				+1.0
1,184,693	-				+0.6
1,184,693	-				-0.2
1,184,741	-		MIT1002_01078	0.11	-2.0
1,184,750	+		MIT1002_01078	0.12	-0.6
1,184,753	+		MIT1002_01078	0.12	+0.5
1,184,784	-		MIT1002_01078	0.15	+0.3
1,184,801	+		MIT1002_01078	0.16	-0.2
1,184,808	+		MIT1002_01078	0.17	-1.0
1,184,814	-		MIT1002_01078	0.17	+0.6