Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00985

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,091,735	-		MIT1002_00984	0.39	-0.4
1,091,735	-		MIT1002_00984	0.39	-1.3
1,091,756	+		MIT1002_00984	0.40	+1.0
1,091,756	-		MIT1002_00984	0.40	+1.0
1,091,766	+		MIT1002_00984	0.41	+0.0
1,091,790	+		MIT1002_00984	0.42	+0.4
1,091,887	-		MIT1002_00984	0.48	+0.2
1,091,950	+		MIT1002_00984	0.52	+1.2
1,091,950	+		MIT1002_00984	0.52	+0.7
1,091,967	+		MIT1002_00984	0.53	+1.9
1,091,967	+		MIT1002_00984	0.53	-3.1
1,092,084	+		MIT1002_00984	0.60	-1.0
1,092,134	-		MIT1002_00984	0.64	-0.2
1,092,134	-		MIT1002_00984	0.64	+1.8
1,092,144	-		MIT1002_00984	0.64	+0.7
1,092,144	-		MIT1002_00984	0.64	+0.1
1,092,144	-		MIT1002_00984	0.64	+1.9
1,092,146	+		MIT1002_00984	0.64	+0.7
1,092,146	+		MIT1002_00984	0.64	+0.4
1,092,154	-		MIT1002_00984	0.65	-0.2
1,092,154	-		MIT1002_00984	0.65	-0.5
1,092,154	-		MIT1002_00984	0.65	+2.3
1,092,157	+		MIT1002_00984	0.65	-1.7
1,092,177	+		MIT1002_00984	0.66	-0.2
1,092,191	+		MIT1002_00984	0.67	+0.3
1,092,192	-		MIT1002_00984	0.67	+0.3
1,092,273	+		MIT1002_00984	0.72	-1.7
1,092,288	-		MIT1002_00984	0.73	+1.1
1,092,443	+		MIT1002_00984	0.83	+0.8
1,092,500	+		MIT1002_00984	0.86	+1.0
1,092,500	+		MIT1002_00984	0.86	+1.0
1,092,601	-				+0.4
1,092,601	-				+0.1
1,092,601	-				-3.1
1,092,728	-				+0.8
1,092,759	-				+1.7
1,092,815	-		MIT1002_00985	0.22	-0.9
1,092,821	+		MIT1002_00985	0.24	+0.2
1,092,917	-		MIT1002_00985	0.49	+0.9
1,092,938	+		MIT1002_00985	0.55	+1.1
1,092,954	-		MIT1002_00985	0.59	+0.3
1,092,976	+		MIT1002_00985	0.65	-0.6
1,092,992	+		MIT1002_00985	0.69	+1.5
1,093,207	+				+1.0
1,093,215	-				+0.2
1,093,215	-				-1.1
1,093,225	-				-1.2
1,093,333	-				+0.2
1,093,354	-				+0.0
1,093,381	+				-1.7
1,093,466	-		MIT1002_00986	0.12	-0.8
1,093,468	-		MIT1002_00986	0.12	+0.2
1,093,472	+		MIT1002_00986	0.12	+0.2
1,093,472	+		MIT1002_00986	0.12	+0.3
1,093,472	+		MIT1002_00986	0.12	-1.1
1,093,480	-		MIT1002_00986	0.13	+0.4
1,093,480	-		MIT1002_00986	0.13	+0.8
1,093,527	+		MIT1002_00986	0.16	-0.9
1,093,641	-		MIT1002_00986	0.25	+0.7
1,093,655	+		MIT1002_00986	0.26	-0.4
1,093,655	+		MIT1002_00986	0.26	-0.1
1,093,655	+		MIT1002_00986	0.26	-0.4
1,093,663	-		MIT1002_00986	0.26	+0.1
1,093,663	-		MIT1002_00986	0.26	+0.1
1,093,663	-		MIT1002_00986	0.26	-0.5
1,093,663	-		MIT1002_00986	0.26	+0.2
1,093,663	-		MIT1002_00986	0.26	+1.3
1,093,686	+		MIT1002_00986	0.28	-1.3
1,093,717	+		MIT1002_00986	0.30	-1.8
1,093,774	+		MIT1002_00986	0.34	+1.0
1,093,782	-		MIT1002_00986	0.35	+0.7
1,093,821	+		MIT1002_00986	0.38	+1.4
1,093,829	+		MIT1002_00986	0.38	-0.1
1,093,895	+		MIT1002_00986	0.43	+0.7
1,093,904	-		MIT1002_00986	0.44	-0.5
1,093,907	+		MIT1002_00986	0.44	+0.0
1,093,937	-		MIT1002_00986	0.46	-0.9
1,094,043	+		MIT1002_00986	0.54	-3.0
1,094,054	+		MIT1002_00986	0.55	+1.5
1,094,074	-		MIT1002_00986	0.56	-0.8
1,094,098	-		MIT1002_00986	0.58	-0.5