Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00954

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,059,521	+		MIT1002_00953	0.67	-1.0
1,059,529	-		MIT1002_00953	0.68	-0.1
1,059,529	-		MIT1002_00953	0.68	-0.8
1,059,556	-		MIT1002_00953	0.69	+0.2
1,059,567	+		MIT1002_00953	0.69	+0.3
1,059,615	-		MIT1002_00953	0.71	+0.7
1,059,651	-		MIT1002_00953	0.72	+1.0
1,059,653	-		MIT1002_00953	0.72	+0.1
1,059,666	+		MIT1002_00953	0.73	-0.1
1,059,705	-		MIT1002_00953	0.74	+0.2
1,059,732	+		MIT1002_00953	0.75	-0.7
1,059,768	+		MIT1002_00953	0.77	-0.0
1,059,811	+		MIT1002_00953	0.78	-0.4
1,059,818	-		MIT1002_00953	0.79	+0.8
1,059,855	+		MIT1002_00953	0.80	+2.0
1,059,860	+		MIT1002_00953	0.80	-0.4
1,059,860	+		MIT1002_00953	0.80	-1.9
1,059,860	+		MIT1002_00953	0.80	-0.6
1,059,860	+		MIT1002_00953	0.80	+0.2
1,059,863	-		MIT1002_00953	0.80	+1.3
1,059,868	-		MIT1002_00953	0.80	+1.6
1,059,873	-		MIT1002_00953	0.81	+0.0
1,059,878	+		MIT1002_00953	0.81	+1.0
1,059,886	-		MIT1002_00953	0.81	-1.4
1,059,931	-		MIT1002_00953	0.83	-0.4
1,059,954	+		MIT1002_00953	0.84	-2.4
1,059,954	+		MIT1002_00953	0.84	-0.6
1,059,997	-		MIT1002_00953	0.85	-0.5
1,060,030	-		MIT1002_00953	0.87	-0.1
1,060,057	-		MIT1002_00953	0.88	+2.4
1,060,139	-				-1.1
1,060,168	+				-2.1
1,060,182	+				+2.1
1,060,307	+				-0.3
1,060,351	+				+2.6
1,060,370	-				+0.3
1,060,411	+				+1.2
1,060,411	+				-0.8
1,060,508	+				+1.1
1,060,516	+				+0.9
1,060,544	+				+0.5
1,060,584	+		MIT1002_00954	0.14	-0.1
1,060,640	+		MIT1002_00954	0.24	+0.5
1,060,648	-		MIT1002_00954	0.26	+1.1
1,060,688	-		MIT1002_00954	0.33	+0.0
1,060,690	+		MIT1002_00954	0.34	+2.0
1,060,709	+		MIT1002_00954	0.37	-0.5
1,060,751	+		MIT1002_00954	0.45	+1.5
1,060,756	+		MIT1002_00954	0.46	+1.0
1,060,759	-		MIT1002_00954	0.46	+1.1
1,060,764	-		MIT1002_00954	0.47	-0.8
1,060,768	+		MIT1002_00954	0.48	-1.4
1,060,778	+		MIT1002_00954	0.50	-0.4
1,060,788	+		MIT1002_00954	0.52	+0.1
1,060,814	+		MIT1002_00954	0.56	+2.2
1,060,867	+		MIT1002_00954	0.66	+1.4
1,060,984	+		MIT1002_00954	0.88	+0.4
1,061,025	+				+2.9
1,061,159	+				-2.0
1,061,318	+		MIT1002_00955	0.14	-0.3
1,061,716	-		MIT1002_00955	0.52	-0.4
1,061,716	-		MIT1002_00955	0.52	-1.6
1,061,819	-		MIT1002_00955	0.62	-0.4
1,061,846	+		MIT1002_00955	0.65	-0.4
1,061,909	+		MIT1002_00955	0.71	-2.4
1,062,041	+		MIT1002_00955	0.83	-0.8
1,062,047	-		MIT1002_00955	0.84	+0.2