Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33470 and QEN71_RS33475 are separated by 38 nucleotides QEN71_RS33475 and QEN71_RS33480 are separated by 194 nucleotides QEN71_RS33480 and QEN71_RS33485 are separated by 304 nucleotides
QEN71_RS33470: QEN71_RS33470 - MFS transporter, at 824,738 to 826,012
_RS33470
QEN71_RS33475: QEN71_RS33475 - NO-inducible flavohemoprotein, at 826,051 to 827,265
_RS33475
QEN71_RS33480: QEN71_RS33480 - high-potential iron-sulfur protein, at 827,460 to 827,771
_RS33480
QEN71_RS33485: QEN71_RS33485 - GNAT family N-acetyltransferase, at 828,076 to 828,531
_RS33485
Position (kb) 826
827
828 Strain fitness (log2 ratio) -2
-1
0
1
2 at 825.053 kb on - strand, within QEN71_RS33470 at 825.122 kb on + strand, within QEN71_RS33470 at 825.209 kb on + strand, within QEN71_RS33470 at 825.209 kb on + strand, within QEN71_RS33470 at 825.209 kb on + strand, within QEN71_RS33470 at 825.209 kb on + strand, within QEN71_RS33470 at 825.209 kb on + strand, within QEN71_RS33470 at 825.210 kb on - strand, within QEN71_RS33470 at 825.210 kb on - strand, within QEN71_RS33470 at 825.210 kb on - strand, within QEN71_RS33470 at 825.210 kb on - strand, within QEN71_RS33470 at 825.210 kb on - strand, within QEN71_RS33470 at 825.313 kb on + strand, within QEN71_RS33470 at 825.503 kb on - strand, within QEN71_RS33470 at 825.503 kb on - strand, within QEN71_RS33470 at 825.542 kb on + strand, within QEN71_RS33470 at 825.542 kb on + strand, within QEN71_RS33470 at 825.543 kb on - strand, within QEN71_RS33470 at 825.543 kb on - strand, within QEN71_RS33470 at 825.543 kb on - strand, within QEN71_RS33470 at 825.543 kb on - strand, within QEN71_RS33470 at 825.669 kb on + strand, within QEN71_RS33470 at 825.670 kb on - strand, within QEN71_RS33470 at 825.670 kb on - strand, within QEN71_RS33470 at 825.864 kb on + strand, within QEN71_RS33470 at 825.864 kb on + strand, within QEN71_RS33470 at 825.895 kb on - strand at 825.900 kb on + strand at 825.900 kb on + strand at 825.900 kb on + strand at 825.900 kb on + strand at 825.901 kb on - strand at 825.901 kb on - strand at 825.901 kb on - strand at 825.901 kb on - strand at 825.901 kb on - strand at 825.901 kb on - strand at 825.901 kb on - strand at 825.901 kb on - strand at 825.919 kb on - strand at 825.919 kb on - strand at 825.975 kb on + strand at 825.975 kb on + strand at 825.984 kb on + strand at 826.010 kb on + strand at 826.010 kb on + strand at 826.010 kb on + strand at 826.010 kb on + strand at 826.010 kb on + strand at 826.011 kb on - strand at 826.011 kb on - strand at 826.034 kb on + strand at 826.034 kb on + strand at 826.034 kb on + strand at 826.035 kb on - strand at 826.053 kb on - strand at 826.053 kb on - strand at 826.085 kb on + strand at 826.085 kb on + strand at 826.085 kb on + strand at 826.107 kb on + strand at 826.108 kb on - strand at 826.136 kb on - strand at 826.166 kb on + strand at 826.166 kb on + strand at 826.166 kb on + strand at 826.166 kb on + strand at 826.166 kb on + strand at 826.166 kb on + strand at 826.166 kb on + strand at 826.166 kb on + strand at 826.166 kb on + strand at 826.167 kb on - strand at 826.167 kb on - strand at 826.167 kb on - strand at 826.167 kb on - strand at 826.167 kb on - strand at 826.167 kb on - strand at 826.167 kb on - strand at 826.170 kb on - strand at 826.170 kb on - strand at 826.229 kb on + strand, within QEN71_RS33475 at 826.235 kb on + strand, within QEN71_RS33475 at 826.235 kb on + strand, within QEN71_RS33475 at 826.235 kb on + strand, within QEN71_RS33475 at 826.235 kb on - strand, within QEN71_RS33475 at 826.236 kb on - strand, within QEN71_RS33475 at 826.236 kb on - strand, within QEN71_RS33475 at 826.236 kb on - strand, within QEN71_RS33475 at 826.236 kb on - strand, within QEN71_RS33475 at 826.275 kb on - strand, within QEN71_RS33475 at 826.350 kb on + strand, within QEN71_RS33475 at 826.513 kb on + strand, within QEN71_RS33475 at 826.513 kb on + strand, within QEN71_RS33475 at 826.513 kb on + strand, within QEN71_RS33475 at 826.514 kb on - strand, within QEN71_RS33475 at 826.514 kb on - strand, within QEN71_RS33475 at 826.514 kb on - strand, within QEN71_RS33475 at 826.559 kb on + strand, within QEN71_RS33475 at 826.610 kb on + strand, within QEN71_RS33475 at 826.610 kb on + strand, within QEN71_RS33475 at 826.610 kb on + strand, within QEN71_RS33475 at 826.610 kb on + strand, within QEN71_RS33475 at 826.611 kb on - strand, within QEN71_RS33475 at 826.611 kb on - strand, within QEN71_RS33475 at 826.643 kb on + strand, within QEN71_RS33475 at 826.644 kb on - strand, within QEN71_RS33475 at 826.697 kb on + strand, within QEN71_RS33475 at 826.697 kb on + strand, within QEN71_RS33475 at 826.697 kb on + strand, within QEN71_RS33475 at 826.698 kb on - strand, within QEN71_RS33475 at 826.698 kb on - strand, within QEN71_RS33475 at 826.698 kb on - strand, within QEN71_RS33475 at 826.698 kb on - strand, within QEN71_RS33475 at 826.698 kb on - strand, within QEN71_RS33475 at 826.698 kb on - strand, within QEN71_RS33475 at 826.800 kb on + strand, within QEN71_RS33475 at 826.800 kb on + strand, within QEN71_RS33475 at 826.800 kb on + strand, within QEN71_RS33475 at 826.801 kb on - strand, within QEN71_RS33475 at 826.939 kb on + strand, within QEN71_RS33475 at 826.940 kb on - strand, within QEN71_RS33475 at 826.940 kb on - strand, within QEN71_RS33475 at 826.982 kb on + strand, within QEN71_RS33475 at 826.996 kb on + strand, within QEN71_RS33475 at 826.997 kb on - strand, within QEN71_RS33475 at 826.997 kb on - strand, within QEN71_RS33475 at 827.081 kb on + strand, within QEN71_RS33475 at 827.181 kb on - strand at 827.242 kb on - strand at 827.392 kb on + strand at 827.392 kb on + strand at 827.392 kb on + strand at 827.476 kb on + strand at 827.477 kb on - strand at 827.560 kb on + strand, within QEN71_RS33480 at 827.642 kb on - strand, within QEN71_RS33480 at 827.743 kb on - strand at 827.796 kb on + strand at 827.797 kb on - strand at 827.962 kb on - strand at 827.962 kb on - strand at 827.972 kb on + strand at 828.184 kb on + strand, within QEN71_RS33485 at 828.185 kb on - strand, within QEN71_RS33485 at 828.185 kb on - strand, within QEN71_RS33485
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 825,053 - QEN71_RS33470 0.25 -0.5 825,122 + QEN71_RS33470 0.30 -0.6 825,209 + QEN71_RS33470 0.37 -0.2 825,209 + QEN71_RS33470 0.37 -0.4 825,209 + QEN71_RS33470 0.37 -0.1 825,209 + QEN71_RS33470 0.37 +0.2 825,209 + QEN71_RS33470 0.37 +0.5 825,210 - QEN71_RS33470 0.37 -0.1 825,210 - QEN71_RS33470 0.37 -1.1 825,210 - QEN71_RS33470 0.37 +0.1 825,210 - QEN71_RS33470 0.37 -0.3 825,210 - QEN71_RS33470 0.37 -0.5 825,313 + QEN71_RS33470 0.45 -2.4 825,503 - QEN71_RS33470 0.60 +1.1 825,503 - QEN71_RS33470 0.60 -0.1 825,542 + QEN71_RS33470 0.63 +0.2 825,542 + QEN71_RS33470 0.63 -0.5 825,543 - QEN71_RS33470 0.63 +0.6 825,543 - QEN71_RS33470 0.63 -0.4 825,543 - QEN71_RS33470 0.63 +0.8 825,543 - QEN71_RS33470 0.63 -0.0 825,669 + QEN71_RS33470 0.73 -0.8 825,670 - QEN71_RS33470 0.73 +1.2 825,670 - QEN71_RS33470 0.73 -0.8 825,864 + QEN71_RS33470 0.88 +0.1 825,864 + QEN71_RS33470 0.88 -0.0 825,895 - +1.4 825,900 + +0.1 825,900 + -0.7 825,900 + -2.0 825,900 + -0.8 825,901 - -1.3 825,901 - -0.2 825,901 - +0.5 825,901 - -1.2 825,901 - -0.1 825,901 - +0.2 825,901 - -0.3 825,901 - -0.8 825,919 - +0.4 825,919 - -0.5 825,975 + +1.1 825,975 + +0.2 825,984 + +0.4 826,010 + -0.8 826,010 + -0.2 826,010 + +0.6 826,010 + +1.9 826,010 + -1.4 826,011 - +1.1 826,011 - +0.4 826,034 + +0.4 826,034 + -0.5 826,034 + +0.3 826,035 - +0.2 826,053 - -1.5 826,053 - -0.4 826,085 + -0.8 826,085 + +0.5 826,085 + -1.2 826,107 + +1.4 826,108 - +0.3 826,136 - -0.5 826,166 + -0.3 826,166 + -0.5 826,166 + -0.8 826,166 + -0.2 826,166 + +0.3 826,166 + -1.8 826,166 + +0.2 826,166 + +0.1 826,166 + +0.2 826,167 - -1.2 826,167 - -0.3 826,167 - +0.2 826,167 - -1.4 826,167 - +0.3 826,167 - +0.4 826,167 - +0.2 826,170 - +0.1 826,170 - -0.3 826,229 + QEN71_RS33475 0.15 -0.3 826,235 + QEN71_RS33475 0.15 +0.3 826,235 + QEN71_RS33475 0.15 -0.2 826,235 + QEN71_RS33475 0.15 -2.0 826,235 - QEN71_RS33475 0.15 +2.3 826,236 - QEN71_RS33475 0.15 -1.5 826,236 - QEN71_RS33475 0.15 -0.7 826,236 - QEN71_RS33475 0.15 +1.4 826,236 - QEN71_RS33475 0.15 +0.2 826,275 - QEN71_RS33475 0.18 +1.1 826,350 + QEN71_RS33475 0.25 -1.1 826,513 + QEN71_RS33475 0.38 +0.0 826,513 + QEN71_RS33475 0.38 -0.8 826,513 + QEN71_RS33475 0.38 -0.3 826,514 - QEN71_RS33475 0.38 -0.4 826,514 - QEN71_RS33475 0.38 +0.1 826,514 - QEN71_RS33475 0.38 -0.4 826,559 + QEN71_RS33475 0.42 +0.5 826,610 + QEN71_RS33475 0.46 -0.4 826,610 + QEN71_RS33475 0.46 -0.1 826,610 + QEN71_RS33475 0.46 +1.2 826,610 + QEN71_RS33475 0.46 +0.0 826,611 - QEN71_RS33475 0.46 -0.8 826,611 - QEN71_RS33475 0.46 -0.4 826,643 + QEN71_RS33475 0.49 -0.4 826,644 - QEN71_RS33475 0.49 -0.1 826,697 + QEN71_RS33475 0.53 -1.4 826,697 + QEN71_RS33475 0.53 -0.7 826,697 + QEN71_RS33475 0.53 -0.4 826,698 - QEN71_RS33475 0.53 -0.2 826,698 - QEN71_RS33475 0.53 +0.4 826,698 - QEN71_RS33475 0.53 -0.8 826,698 - QEN71_RS33475 0.53 -0.6 826,698 - QEN71_RS33475 0.53 -1.8 826,698 - QEN71_RS33475 0.53 -0.3 826,800 + QEN71_RS33475 0.62 +0.3 826,800 + QEN71_RS33475 0.62 -0.2 826,800 + QEN71_RS33475 0.62 +0.1 826,801 - QEN71_RS33475 0.62 +0.4 826,939 + QEN71_RS33475 0.73 +0.4 826,940 - QEN71_RS33475 0.73 +0.0 826,940 - QEN71_RS33475 0.73 -1.0 826,982 + QEN71_RS33475 0.77 -1.2 826,996 + QEN71_RS33475 0.78 -1.5 826,997 - QEN71_RS33475 0.78 +0.2 826,997 - QEN71_RS33475 0.78 +0.9 827,081 + QEN71_RS33475 0.85 +0.5 827,181 - -0.5 827,242 - -1.2 827,392 + +0.1 827,392 + +2.0 827,392 + +1.5 827,476 + +0.1 827,477 - -1.2 827,560 + QEN71_RS33480 0.32 -0.4 827,642 - QEN71_RS33480 0.58 +0.6 827,743 - -0.1 827,796 + +0.3 827,797 - -0.5 827,962 - +0.6 827,962 - -0.5 827,972 + -0.2 828,184 + QEN71_RS33485 0.24 +0.1 828,185 - QEN71_RS33485 0.24 +0.2 828,185 - QEN71_RS33485 0.24 +1.0
Or see this region's nucleotide sequence