Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS31840 and QEN71_RS31845 are separated by 212 nucleotides QEN71_RS31845 and QEN71_RS31850 are separated by 21 nucleotides QEN71_RS31850 and QEN71_RS31855 are separated by 184 nucleotides
QEN71_RS31840: QEN71_RS31840 - glucosidase, at 494,673 to 497,417
_RS31840
QEN71_RS31845: QEN71_RS31845 - pseudouridine-5'-phosphate glycosidase, at 497,630 to 498,556
_RS31845
QEN71_RS31850: QEN71_RS31850 - molybdopterin-dependent oxidoreductase, at 498,578 to 499,174
_RS31850
QEN71_RS31855: QEN71_RS31855 - cupin domain-containing protein, at 499,359 to 499,772
_RS31855
Position (kb) 497
498
499 Strain fitness (log2 ratio) -2
-1
0
1
2 at 496.778 kb on + strand, within QEN71_RS31840 at 496.879 kb on + strand, within QEN71_RS31840 at 496.879 kb on + strand, within QEN71_RS31840 at 497.012 kb on - strand, within QEN71_RS31840 at 497.017 kb on + strand, within QEN71_RS31840 at 497.017 kb on + strand, within QEN71_RS31840 at 497.017 kb on + strand, within QEN71_RS31840 at 497.018 kb on - strand, within QEN71_RS31840 at 497.032 kb on + strand, within QEN71_RS31840 at 497.032 kb on + strand, within QEN71_RS31840 at 497.032 kb on + strand, within QEN71_RS31840 at 497.065 kb on + strand, within QEN71_RS31840 at 497.065 kb on + strand, within QEN71_RS31840 at 497.065 kb on + strand, within QEN71_RS31840 at 497.065 kb on + strand, within QEN71_RS31840 at 497.066 kb on - strand, within QEN71_RS31840 at 497.224 kb on + strand at 497.224 kb on + strand at 497.225 kb on - strand at 497.225 kb on - strand at 497.225 kb on - strand at 497.257 kb on + strand at 497.275 kb on + strand at 497.276 kb on - strand at 497.323 kb on + strand at 497.518 kb on + strand at 497.518 kb on + strand at 497.518 kb on + strand at 497.578 kb on - strand at 497.595 kb on + strand at 497.595 kb on + strand at 497.595 kb on + strand at 497.596 kb on - strand at 497.596 kb on - strand at 497.596 kb on - strand at 498.212 kb on + strand, within QEN71_RS31845 at 498.212 kb on + strand, within QEN71_RS31845 at 498.212 kb on + strand, within QEN71_RS31845 at 498.213 kb on - strand, within QEN71_RS31845 at 498.213 kb on - strand, within QEN71_RS31845 at 498.213 kb on - strand, within QEN71_RS31845 at 498.554 kb on + strand at 498.579 kb on + strand at 498.579 kb on + strand at 498.579 kb on + strand at 498.590 kb on + strand at 498.591 kb on - strand at 498.591 kb on - strand at 498.678 kb on + strand, within QEN71_RS31850 at 498.679 kb on - strand, within QEN71_RS31850 at 498.679 kb on - strand, within QEN71_RS31850 at 498.690 kb on - strand, within QEN71_RS31850 at 498.820 kb on + strand, within QEN71_RS31850 at 498.821 kb on - strand, within QEN71_RS31850 at 498.821 kb on - strand, within QEN71_RS31850 at 498.854 kb on + strand, within QEN71_RS31850 at 498.855 kb on - strand, within QEN71_RS31850 at 498.855 kb on - strand, within QEN71_RS31850 at 498.878 kb on + strand, within QEN71_RS31850 at 498.901 kb on - strand, within QEN71_RS31850 at 498.901 kb on - strand, within QEN71_RS31850 at 498.998 kb on + strand, within QEN71_RS31850 at 498.999 kb on - strand, within QEN71_RS31850 at 498.999 kb on - strand, within QEN71_RS31850 at 499.193 kb on + strand at 499.193 kb on + strand at 499.204 kb on + strand at 499.205 kb on - strand at 499.215 kb on + strand at 499.216 kb on - strand at 499.216 kb on - strand at 499.218 kb on - strand at 499.218 kb on - strand at 499.218 kb on - strand at 499.233 kb on - strand at 499.314 kb on - strand at 499.358 kb on + strand at 499.359 kb on - strand at 499.359 kb on - strand at 499.443 kb on + strand, within QEN71_RS31855 at 499.444 kb on - strand, within QEN71_RS31855
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 496,778 + QEN71_RS31840 0.77 -0.2 496,879 + QEN71_RS31840 0.80 +0.4 496,879 + QEN71_RS31840 0.80 -0.1 497,012 - QEN71_RS31840 0.85 -0.7 497,017 + QEN71_RS31840 0.85 -0.6 497,017 + QEN71_RS31840 0.85 -0.5 497,017 + QEN71_RS31840 0.85 +1.2 497,018 - QEN71_RS31840 0.85 +0.9 497,032 + QEN71_RS31840 0.86 -0.7 497,032 + QEN71_RS31840 0.86 +1.8 497,032 + QEN71_RS31840 0.86 +0.3 497,065 + QEN71_RS31840 0.87 -0.1 497,065 + QEN71_RS31840 0.87 -0.3 497,065 + QEN71_RS31840 0.87 +0.8 497,065 + QEN71_RS31840 0.87 +0.9 497,066 - QEN71_RS31840 0.87 -0.2 497,224 + -1.2 497,224 + +0.8 497,225 - -0.4 497,225 - -0.7 497,225 - -0.3 497,257 + +0.1 497,275 + +0.0 497,276 - +0.2 497,323 + +0.6 497,518 + +0.3 497,518 + -2.0 497,518 + -0.4 497,578 - +0.5 497,595 + +0.0 497,595 + -0.5 497,595 + -0.8 497,596 - +0.2 497,596 - +0.1 497,596 - -0.0 498,212 + QEN71_RS31845 0.63 -1.7 498,212 + QEN71_RS31845 0.63 -2.3 498,212 + QEN71_RS31845 0.63 -1.2 498,213 - QEN71_RS31845 0.63 +0.1 498,213 - QEN71_RS31845 0.63 -1.1 498,213 - QEN71_RS31845 0.63 -2.6 498,554 + +1.1 498,579 + -1.4 498,579 + -0.3 498,579 + -1.1 498,590 + +0.3 498,591 - -0.9 498,591 - -0.0 498,678 + QEN71_RS31850 0.17 +0.7 498,679 - QEN71_RS31850 0.17 -0.4 498,679 - QEN71_RS31850 0.17 -1.2 498,690 - QEN71_RS31850 0.19 +0.8 498,820 + QEN71_RS31850 0.41 -0.0 498,821 - QEN71_RS31850 0.41 +0.6 498,821 - QEN71_RS31850 0.41 -0.9 498,854 + QEN71_RS31850 0.46 +0.8 498,855 - QEN71_RS31850 0.46 -0.2 498,855 - QEN71_RS31850 0.46 +0.0 498,878 + QEN71_RS31850 0.50 -0.8 498,901 - QEN71_RS31850 0.54 -0.2 498,901 - QEN71_RS31850 0.54 +1.9 498,998 + QEN71_RS31850 0.70 +0.6 498,999 - QEN71_RS31850 0.71 -0.4 498,999 - QEN71_RS31850 0.71 +0.8 499,193 + +0.2 499,193 + -0.1 499,204 + +0.2 499,205 - -0.2 499,215 + -0.1 499,216 - -0.8 499,216 - -0.3 499,218 - -0.1 499,218 - +0.4 499,218 - -0.7 499,233 - -1.4 499,314 - -0.4 499,358 + -0.8 499,359 - -0.9 499,359 - -0.6 499,443 + QEN71_RS31855 0.20 +0.3 499,444 - QEN71_RS31855 0.21 +1.5
Or see this region's nucleotide sequence