Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS30740 and QEN71_RS30745 are separated by 128 nucleotides QEN71_RS30745 and QEN71_RS30750 are separated by 12 nucleotides
QEN71_RS30740: QEN71_RS30740 - aldo/keto reductase, at 238,965 to 239,960
_RS30740
QEN71_RS30745: QEN71_RS30745 - hypothetical protein, at 240,089 to 240,334
_RS30745
QEN71_RS30750: QEN71_RS30750 - mechanosensitive ion channel, at 240,347 to 241,636
_RS30750
Position (kb) 240
241 Strain fitness (log2 ratio) -1
0
1
2 at 239.187 kb on + strand, within QEN71_RS30740 at 239.187 kb on + strand, within QEN71_RS30740 at 239.187 kb on + strand, within QEN71_RS30740 at 239.187 kb on + strand, within QEN71_RS30740 at 239.187 kb on + strand, within QEN71_RS30740 at 239.187 kb on + strand, within QEN71_RS30740 at 239.188 kb on - strand, within QEN71_RS30740 at 239.222 kb on - strand, within QEN71_RS30740 at 239.371 kb on + strand, within QEN71_RS30740 at 239.481 kb on - strand, within QEN71_RS30740 at 239.481 kb on - strand, within QEN71_RS30740 at 239.483 kb on - strand, within QEN71_RS30740 at 239.483 kb on - strand, within QEN71_RS30740 at 239.548 kb on + strand, within QEN71_RS30740 at 239.549 kb on - strand, within QEN71_RS30740 at 239.569 kb on + strand, within QEN71_RS30740 at 239.569 kb on + strand, within QEN71_RS30740 at 239.570 kb on - strand, within QEN71_RS30740 at 239.570 kb on - strand, within QEN71_RS30740 at 239.581 kb on + strand, within QEN71_RS30740 at 239.582 kb on - strand, within QEN71_RS30740 at 239.779 kb on + strand, within QEN71_RS30740 at 239.779 kb on + strand, within QEN71_RS30740 at 239.779 kb on + strand, within QEN71_RS30740 at 239.780 kb on - strand, within QEN71_RS30740 at 239.780 kb on - strand, within QEN71_RS30740 at 239.780 kb on - strand, within QEN71_RS30740 at 239.780 kb on - strand, within QEN71_RS30740 at 239.780 kb on - strand, within QEN71_RS30740 at 239.893 kb on + strand at 239.893 kb on + strand at 239.894 kb on - strand at 239.894 kb on - strand at 239.925 kb on - strand at 239.953 kb on + strand at 239.953 kb on + strand at 239.953 kb on + strand at 239.954 kb on - strand at 239.954 kb on - strand at 239.954 kb on - strand at 239.954 kb on - strand at 239.954 kb on - strand at 239.990 kb on + strand at 239.991 kb on - strand at 239.991 kb on - strand at 240.011 kb on - strand at 240.119 kb on - strand, within QEN71_RS30745 at 240.146 kb on + strand, within QEN71_RS30745 at 240.146 kb on + strand, within QEN71_RS30745 at 240.381 kb on + strand at 240.381 kb on + strand at 240.382 kb on - strand at 240.382 kb on - strand at 240.382 kb on - strand at 240.382 kb on - strand at 240.382 kb on - strand at 240.382 kb on - strand at 240.382 kb on - strand at 240.490 kb on + strand, within QEN71_RS30750 at 240.491 kb on - strand, within QEN71_RS30750 at 240.606 kb on + strand, within QEN71_RS30750 at 240.607 kb on - strand, within QEN71_RS30750 at 240.838 kb on - strand, within QEN71_RS30750 at 240.957 kb on + strand, within QEN71_RS30750 at 240.957 kb on + strand, within QEN71_RS30750 at 240.957 kb on + strand, within QEN71_RS30750 at 240.957 kb on + strand, within QEN71_RS30750 at 240.957 kb on + strand, within QEN71_RS30750 at 240.957 kb on + strand, within QEN71_RS30750 at 240.958 kb on - strand, within QEN71_RS30750 at 240.958 kb on - strand, within QEN71_RS30750 at 240.958 kb on - strand, within QEN71_RS30750 at 240.958 kb on - strand, within QEN71_RS30750 at 240.958 kb on - strand, within QEN71_RS30750 at 240.958 kb on - strand, within QEN71_RS30750 at 240.958 kb on - strand, within QEN71_RS30750 at 241.087 kb on + strand, within QEN71_RS30750 at 241.087 kb on + strand, within QEN71_RS30750 at 241.330 kb on + strand, within QEN71_RS30750 at 241.330 kb on + strand, within QEN71_RS30750 at 241.330 kb on + strand, within QEN71_RS30750 at 241.331 kb on - strand, within QEN71_RS30750
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 239,187 + QEN71_RS30740 0.22 +1.3 239,187 + QEN71_RS30740 0.22 -0.0 239,187 + QEN71_RS30740 0.22 +0.5 239,187 + QEN71_RS30740 0.22 -0.4 239,187 + QEN71_RS30740 0.22 -0.5 239,187 + QEN71_RS30740 0.22 +0.9 239,188 - QEN71_RS30740 0.22 -0.1 239,222 - QEN71_RS30740 0.26 +2.3 239,371 + QEN71_RS30740 0.41 -0.6 239,481 - QEN71_RS30740 0.52 -1.6 239,481 - QEN71_RS30740 0.52 -1.7 239,483 - QEN71_RS30740 0.52 +1.0 239,483 - QEN71_RS30740 0.52 -0.5 239,548 + QEN71_RS30740 0.59 +0.9 239,549 - QEN71_RS30740 0.59 -0.4 239,569 + QEN71_RS30740 0.61 +0.1 239,569 + QEN71_RS30740 0.61 -0.3 239,570 - QEN71_RS30740 0.61 +0.4 239,570 - QEN71_RS30740 0.61 -0.6 239,581 + QEN71_RS30740 0.62 +1.2 239,582 - QEN71_RS30740 0.62 +0.3 239,779 + QEN71_RS30740 0.82 +0.3 239,779 + QEN71_RS30740 0.82 -0.5 239,779 + QEN71_RS30740 0.82 +0.1 239,780 - QEN71_RS30740 0.82 -0.6 239,780 - QEN71_RS30740 0.82 +0.2 239,780 - QEN71_RS30740 0.82 +0.4 239,780 - QEN71_RS30740 0.82 -0.1 239,780 - QEN71_RS30740 0.82 -0.3 239,893 + -0.1 239,893 + +0.4 239,894 - +0.0 239,894 - +0.5 239,925 - -0.2 239,953 + +0.9 239,953 + +0.0 239,953 + +0.2 239,954 - -0.3 239,954 - -0.7 239,954 - -0.2 239,954 - -0.9 239,954 - -0.5 239,990 + -0.0 239,991 - -1.6 239,991 - +0.5 240,011 - -1.1 240,119 - QEN71_RS30745 0.12 +0.0 240,146 + QEN71_RS30745 0.23 -0.9 240,146 + QEN71_RS30745 0.23 -1.4 240,381 + +0.4 240,381 + -0.2 240,382 - +0.4 240,382 - -0.1 240,382 - +1.7 240,382 - -0.2 240,382 - +0.5 240,382 - -0.2 240,382 - +0.6 240,490 + QEN71_RS30750 0.11 +0.4 240,491 - QEN71_RS30750 0.11 +0.2 240,606 + QEN71_RS30750 0.20 +0.2 240,607 - QEN71_RS30750 0.20 +0.4 240,838 - QEN71_RS30750 0.38 +0.5 240,957 + QEN71_RS30750 0.47 +1.4 240,957 + QEN71_RS30750 0.47 -0.1 240,957 + QEN71_RS30750 0.47 -0.6 240,957 + QEN71_RS30750 0.47 -0.9 240,957 + QEN71_RS30750 0.47 +0.3 240,957 + QEN71_RS30750 0.47 +0.4 240,958 - QEN71_RS30750 0.47 -1.6 240,958 - QEN71_RS30750 0.47 -1.3 240,958 - QEN71_RS30750 0.47 +0.6 240,958 - QEN71_RS30750 0.47 -0.5 240,958 - QEN71_RS30750 0.47 -0.6 240,958 - QEN71_RS30750 0.47 +0.2 240,958 - QEN71_RS30750 0.47 -0.7 241,087 + QEN71_RS30750 0.57 +1.4 241,087 + QEN71_RS30750 0.57 -0.5 241,330 + QEN71_RS30750 0.76 +0.8 241,330 + QEN71_RS30750 0.76 -1.0 241,330 + QEN71_RS30750 0.76 -1.0 241,331 - QEN71_RS30750 0.76 +0.0
Or see this region's nucleotide sequence