Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS22680 and QEN71_RS22685 overlap by 4 nucleotides QEN71_RS22685 and QEN71_RS22690 are separated by 57 nucleotides
QEN71_RS22680: QEN71_RS22680 - ATP-binding cassette domain-containing protein, at 5,030,139 to 5,031,092
_RS22680
QEN71_RS22685: QEN71_RS22685 - aliphatic sulfonate ABC transporter permease SsuC, at 5,031,089 to 5,031,913
_RS22685
QEN71_RS22690: QEN71_RS22690 - FMNH2-dependent alkanesulfonate monooxygenase, at 5,031,971 to 5,033,128
_RS22690
Position (kb) 5031
5032 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5030.130 kb on - strand at 5030.130 kb on - strand at 5030.132 kb on + strand at 5030.132 kb on + strand at 5030.132 kb on + strand at 5030.132 kb on + strand at 5030.133 kb on - strand at 5030.142 kb on + strand at 5030.142 kb on + strand at 5030.142 kb on + strand at 5030.913 kb on + strand, within QEN71_RS22680 at 5030.913 kb on + strand, within QEN71_RS22680 at 5030.914 kb on - strand, within QEN71_RS22680 at 5031.064 kb on + strand at 5031.064 kb on + strand at 5031.065 kb on - strand at 5031.187 kb on - strand, within QEN71_RS22685 at 5031.187 kb on - strand, within QEN71_RS22685 at 5031.189 kb on - strand, within QEN71_RS22685 at 5031.189 kb on - strand, within QEN71_RS22685 at 5031.189 kb on - strand, within QEN71_RS22685 at 5031.249 kb on + strand, within QEN71_RS22685 at 5031.250 kb on - strand, within QEN71_RS22685 at 5031.372 kb on + strand, within QEN71_RS22685 at 5031.447 kb on + strand, within QEN71_RS22685 at 5031.447 kb on + strand, within QEN71_RS22685 at 5031.447 kb on + strand, within QEN71_RS22685 at 5031.447 kb on + strand, within QEN71_RS22685 at 5031.447 kb on + strand, within QEN71_RS22685 at 5031.448 kb on - strand, within QEN71_RS22685 at 5031.448 kb on - strand, within QEN71_RS22685 at 5031.448 kb on - strand, within QEN71_RS22685 at 5031.448 kb on - strand, within QEN71_RS22685 at 5031.460 kb on - strand, within QEN71_RS22685 at 5031.460 kb on - strand, within QEN71_RS22685 at 5031.460 kb on - strand, within QEN71_RS22685 at 5031.460 kb on - strand, within QEN71_RS22685 at 5031.549 kb on - strand, within QEN71_RS22685 at 5031.601 kb on + strand, within QEN71_RS22685 at 5031.602 kb on - strand, within QEN71_RS22685 at 5031.913 kb on + strand at 5031.913 kb on + strand at 5031.914 kb on - strand at 5031.914 kb on - strand at 5031.914 kb on - strand at 5031.914 kb on - strand at 5031.996 kb on + strand at 5031.996 kb on + strand at 5031.996 kb on + strand at 5031.997 kb on - strand at 5031.997 kb on - strand at 5032.255 kb on - strand, within QEN71_RS22690 at 5032.542 kb on + strand, within QEN71_RS22690 at 5032.542 kb on + strand, within QEN71_RS22690 at 5032.542 kb on + strand, within QEN71_RS22690 at 5032.542 kb on + strand, within QEN71_RS22690 at 5032.542 kb on + strand, within QEN71_RS22690 at 5032.543 kb on - strand, within QEN71_RS22690 at 5032.543 kb on - strand, within QEN71_RS22690 at 5032.632 kb on + strand, within QEN71_RS22690 at 5032.632 kb on + strand, within QEN71_RS22690 at 5032.750 kb on - strand, within QEN71_RS22690
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 5,030,130 - +0.5 5,030,130 - -0.3 5,030,132 + +0.4 5,030,132 + +0.7 5,030,132 + -0.4 5,030,132 + -0.2 5,030,133 - -0.2 5,030,142 + +1.9 5,030,142 + +0.9 5,030,142 + -0.0 5,030,913 + QEN71_RS22680 0.81 -1.1 5,030,913 + QEN71_RS22680 0.81 +1.6 5,030,914 - QEN71_RS22680 0.81 -0.3 5,031,064 + -0.5 5,031,064 + -0.3 5,031,065 - -1.2 5,031,187 - QEN71_RS22685 0.12 +0.3 5,031,187 - QEN71_RS22685 0.12 -0.8 5,031,189 - QEN71_RS22685 0.12 -1.0 5,031,189 - QEN71_RS22685 0.12 -0.1 5,031,189 - QEN71_RS22685 0.12 -0.6 5,031,249 + QEN71_RS22685 0.19 -0.8 5,031,250 - QEN71_RS22685 0.20 +0.2 5,031,372 + QEN71_RS22685 0.34 -2.0 5,031,447 + QEN71_RS22685 0.43 +0.0 5,031,447 + QEN71_RS22685 0.43 -0.0 5,031,447 + QEN71_RS22685 0.43 -0.7 5,031,447 + QEN71_RS22685 0.43 -0.4 5,031,447 + QEN71_RS22685 0.43 -0.8 5,031,448 - QEN71_RS22685 0.44 -0.1 5,031,448 - QEN71_RS22685 0.44 +1.0 5,031,448 - QEN71_RS22685 0.44 +0.2 5,031,448 - QEN71_RS22685 0.44 -0.6 5,031,460 - QEN71_RS22685 0.45 -0.7 5,031,460 - QEN71_RS22685 0.45 +0.2 5,031,460 - QEN71_RS22685 0.45 -0.1 5,031,460 - QEN71_RS22685 0.45 -0.7 5,031,549 - QEN71_RS22685 0.56 +0.6 5,031,601 + QEN71_RS22685 0.62 +0.6 5,031,602 - QEN71_RS22685 0.62 +1.5 5,031,913 + -0.6 5,031,913 + +0.1 5,031,914 - -1.0 5,031,914 - +0.5 5,031,914 - -0.5 5,031,914 - +0.1 5,031,996 + +0.4 5,031,996 + +0.1 5,031,996 + -0.1 5,031,997 - -0.3 5,031,997 - -0.5 5,032,255 - QEN71_RS22690 0.25 +0.7 5,032,542 + QEN71_RS22690 0.49 -0.8 5,032,542 + QEN71_RS22690 0.49 +0.3 5,032,542 + QEN71_RS22690 0.49 -0.6 5,032,542 + QEN71_RS22690 0.49 +0.1 5,032,542 + QEN71_RS22690 0.49 -0.1 5,032,543 - QEN71_RS22690 0.49 +0.8 5,032,543 - QEN71_RS22690 0.49 -0.4 5,032,632 + QEN71_RS22690 0.57 +0.3 5,032,632 + QEN71_RS22690 0.57 +1.6 5,032,750 - QEN71_RS22690 0.67 -0.7
Or see this region's nucleotide sequence