Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03960 and QEN71_RS03965 are separated by 414 nucleotides QEN71_RS03965 and QEN71_RS03970 are separated by 83 nucleotides
QEN71_RS03960: QEN71_RS03960 - GNAT family N-acetyltransferase, at 876,328 to 876,894
_RS03960
QEN71_RS03965: QEN71_RS03965 - MFS transporter, at 877,309 to 878,610
_RS03965
QEN71_RS03970: QEN71_RS03970 - tetratricopeptide repeat protein, at 878,694 to 880,541
_RS03970
Position (kb) 877
878
879 Strain fitness (log2 ratio) -2
-1
0
1
2 at 876.374 kb on + strand at 876.406 kb on - strand, within QEN71_RS03960 at 876.406 kb on - strand, within QEN71_RS03960 at 876.485 kb on + strand, within QEN71_RS03960 at 876.485 kb on + strand, within QEN71_RS03960 at 876.485 kb on + strand, within QEN71_RS03960 at 876.485 kb on + strand, within QEN71_RS03960 at 876.485 kb on + strand, within QEN71_RS03960 at 876.485 kb on + strand, within QEN71_RS03960 at 876.485 kb on + strand, within QEN71_RS03960 at 876.486 kb on - strand, within QEN71_RS03960 at 876.486 kb on - strand, within QEN71_RS03960 at 876.486 kb on - strand, within QEN71_RS03960 at 876.486 kb on - strand, within QEN71_RS03960 at 876.491 kb on + strand, within QEN71_RS03960 at 876.491 kb on + strand, within QEN71_RS03960 at 876.491 kb on + strand, within QEN71_RS03960 at 876.492 kb on - strand, within QEN71_RS03960 at 876.492 kb on - strand, within QEN71_RS03960 at 876.492 kb on - strand, within QEN71_RS03960 at 876.492 kb on - strand, within QEN71_RS03960 at 876.492 kb on - strand, within QEN71_RS03960 at 876.492 kb on - strand, within QEN71_RS03960 at 876.722 kb on + strand, within QEN71_RS03960 at 876.722 kb on + strand, within QEN71_RS03960 at 876.782 kb on + strand, within QEN71_RS03960 at 876.782 kb on + strand, within QEN71_RS03960 at 876.782 kb on + strand, within QEN71_RS03960 at 876.804 kb on + strand, within QEN71_RS03960 at 876.804 kb on + strand, within QEN71_RS03960 at 877.059 kb on + strand at 877.085 kb on + strand at 877.085 kb on + strand at 877.085 kb on + strand at 877.086 kb on - strand at 877.086 kb on - strand at 877.088 kb on + strand at 877.089 kb on - strand at 877.135 kb on + strand at 877.136 kb on - strand at 877.164 kb on - strand at 877.164 kb on - strand at 877.164 kb on - strand at 877.298 kb on + strand at 877.298 kb on + strand at 877.298 kb on + strand at 877.298 kb on + strand at 877.298 kb on + strand at 877.299 kb on - strand at 877.299 kb on - strand at 877.299 kb on - strand at 877.304 kb on + strand at 877.304 kb on + strand at 877.304 kb on + strand at 877.304 kb on + strand at 877.304 kb on + strand at 877.304 kb on + strand at 877.304 kb on + strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.305 kb on - strand at 877.334 kb on + strand at 877.335 kb on - strand at 877.335 kb on - strand at 877.335 kb on - strand at 877.335 kb on - strand at 877.399 kb on + strand at 877.399 kb on + strand at 877.400 kb on - strand at 877.400 kb on - strand at 877.400 kb on - strand at 877.414 kb on + strand at 877.414 kb on + strand at 877.414 kb on + strand at 877.414 kb on + strand at 877.414 kb on + strand at 877.415 kb on - strand at 877.415 kb on - strand at 877.415 kb on - strand at 877.415 kb on - strand at 877.415 kb on - strand at 877.415 kb on - strand at 877.423 kb on + strand at 877.423 kb on + strand at 877.423 kb on + strand at 877.424 kb on - strand at 877.424 kb on - strand at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.447 kb on + strand, within QEN71_RS03965 at 877.448 kb on - strand, within QEN71_RS03965 at 877.448 kb on - strand, within QEN71_RS03965 at 877.448 kb on - strand, within QEN71_RS03965 at 877.448 kb on - strand, within QEN71_RS03965 at 877.448 kb on - strand, within QEN71_RS03965 at 877.549 kb on + strand, within QEN71_RS03965 at 877.549 kb on + strand, within QEN71_RS03965 at 877.550 kb on - strand, within QEN71_RS03965 at 877.550 kb on - strand, within QEN71_RS03965 at 877.550 kb on - strand, within QEN71_RS03965 at 877.735 kb on + strand, within QEN71_RS03965 at 877.735 kb on + strand, within QEN71_RS03965 at 877.735 kb on + strand, within QEN71_RS03965 at 877.735 kb on + strand, within QEN71_RS03965 at 877.736 kb on - strand, within QEN71_RS03965 at 877.736 kb on - strand, within QEN71_RS03965 at 877.736 kb on - strand, within QEN71_RS03965 at 877.736 kb on - strand, within QEN71_RS03965 at 877.736 kb on - strand, within QEN71_RS03965 at 877.736 kb on - strand, within QEN71_RS03965 at 877.774 kb on + strand, within QEN71_RS03965 at 877.774 kb on + strand, within QEN71_RS03965 at 877.774 kb on + strand, within QEN71_RS03965 at 877.774 kb on + strand, within QEN71_RS03965 at 877.774 kb on + strand, within QEN71_RS03965 at 877.774 kb on + strand, within QEN71_RS03965 at 877.775 kb on - strand, within QEN71_RS03965 at 877.775 kb on - strand, within QEN71_RS03965 at 877.775 kb on - strand, within QEN71_RS03965 at 877.775 kb on - strand, within QEN71_RS03965 at 878.049 kb on + strand, within QEN71_RS03965 at 878.049 kb on + strand, within QEN71_RS03965 at 878.049 kb on + strand, within QEN71_RS03965 at 878.077 kb on + strand, within QEN71_RS03965 at 878.077 kb on + strand, within QEN71_RS03965 at 878.077 kb on + strand, within QEN71_RS03965 at 878.077 kb on + strand, within QEN71_RS03965 at 878.077 kb on + strand, within QEN71_RS03965 at 878.077 kb on + strand, within QEN71_RS03965 at 878.078 kb on - strand, within QEN71_RS03965 at 878.078 kb on - strand, within QEN71_RS03965 at 878.078 kb on - strand, within QEN71_RS03965 at 878.078 kb on - strand, within QEN71_RS03965 at 878.078 kb on - strand, within QEN71_RS03965 at 878.092 kb on + strand, within QEN71_RS03965 at 878.092 kb on + strand, within QEN71_RS03965 at 878.093 kb on - strand, within QEN71_RS03965 at 878.093 kb on - strand, within QEN71_RS03965 at 878.093 kb on - strand, within QEN71_RS03965 at 878.093 kb on - strand, within QEN71_RS03965 at 878.139 kb on + strand, within QEN71_RS03965 at 878.139 kb on + strand, within QEN71_RS03965 at 878.140 kb on - strand, within QEN71_RS03965 at 878.140 kb on - strand, within QEN71_RS03965 at 878.269 kb on + strand, within QEN71_RS03965 at 878.269 kb on + strand, within QEN71_RS03965 at 878.269 kb on + strand, within QEN71_RS03965 at 878.270 kb on - strand, within QEN71_RS03965 at 878.270 kb on - strand, within QEN71_RS03965 at 878.347 kb on + strand, within QEN71_RS03965 at 878.348 kb on - strand, within QEN71_RS03965 at 878.356 kb on + strand, within QEN71_RS03965 at 878.356 kb on + strand, within QEN71_RS03965 at 878.357 kb on - strand, within QEN71_RS03965 at 878.357 kb on - strand, within QEN71_RS03965 at 878.431 kb on + strand, within QEN71_RS03965 at 878.431 kb on + strand, within QEN71_RS03965 at 878.432 kb on - strand, within QEN71_RS03965 at 878.432 kb on - strand, within QEN71_RS03965 at 878.432 kb on - strand, within QEN71_RS03965 at 878.479 kb on + strand, within QEN71_RS03965 at 878.479 kb on + strand, within QEN71_RS03965 at 878.479 kb on + strand, within QEN71_RS03965 at 878.479 kb on + strand, within QEN71_RS03965 at 878.479 kb on + strand, within QEN71_RS03965 at 878.479 kb on + strand, within QEN71_RS03965 at 878.480 kb on - strand at 878.480 kb on - strand at 878.480 kb on - strand at 878.480 kb on - strand at 878.480 kb on - strand at 878.570 kb on - strand at 878.570 kb on - strand at 878.885 kb on + strand, within QEN71_RS03970 at 878.886 kb on - strand, within QEN71_RS03970 at 879.205 kb on + strand, within QEN71_RS03970 at 879.553 kb on + strand, within QEN71_RS03970 at 879.553 kb on + strand, within QEN71_RS03970 at 879.554 kb on - strand, within QEN71_RS03970
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 876,374 + +0.2 876,406 - QEN71_RS03960 0.14 -0.7 876,406 - QEN71_RS03960 0.14 +2.2 876,485 + QEN71_RS03960 0.28 -1.6 876,485 + QEN71_RS03960 0.28 -2.3 876,485 + QEN71_RS03960 0.28 -0.3 876,485 + QEN71_RS03960 0.28 -0.9 876,485 + QEN71_RS03960 0.28 -0.0 876,485 + QEN71_RS03960 0.28 +0.0 876,485 + QEN71_RS03960 0.28 -0.1 876,486 - QEN71_RS03960 0.28 -0.4 876,486 - QEN71_RS03960 0.28 -1.1 876,486 - QEN71_RS03960 0.28 -0.1 876,486 - QEN71_RS03960 0.28 -0.2 876,491 + QEN71_RS03960 0.29 -0.5 876,491 + QEN71_RS03960 0.29 -1.3 876,491 + QEN71_RS03960 0.29 +0.4 876,492 - QEN71_RS03960 0.29 +0.3 876,492 - QEN71_RS03960 0.29 +0.6 876,492 - QEN71_RS03960 0.29 -0.3 876,492 - QEN71_RS03960 0.29 +0.6 876,492 - QEN71_RS03960 0.29 -0.4 876,492 - QEN71_RS03960 0.29 +0.5 876,722 + QEN71_RS03960 0.69 -0.6 876,722 + QEN71_RS03960 0.69 +0.4 876,782 + QEN71_RS03960 0.80 -0.8 876,782 + QEN71_RS03960 0.80 +1.2 876,782 + QEN71_RS03960 0.80 -0.3 876,804 + QEN71_RS03960 0.84 +0.4 876,804 + QEN71_RS03960 0.84 +0.5 877,059 + -0.4 877,085 + -2.3 877,085 + -1.6 877,085 + -0.2 877,086 - -1.1 877,086 - -0.9 877,088 + +0.0 877,089 - +0.4 877,135 + -0.6 877,136 - +0.4 877,164 - +0.4 877,164 - +0.1 877,164 - +0.1 877,298 + -1.1 877,298 + +0.2 877,298 + -0.2 877,298 + -0.4 877,298 + -1.4 877,299 - -0.6 877,299 - -0.8 877,299 - +2.5 877,304 + +0.4 877,304 + -0.2 877,304 + -0.6 877,304 + -0.1 877,304 + -0.6 877,304 + -0.6 877,304 + +0.2 877,305 - -1.2 877,305 - +0.2 877,305 - -0.5 877,305 - +1.8 877,305 - -1.0 877,305 - +0.7 877,305 - -1.1 877,305 - -0.5 877,305 - +0.6 877,305 - +1.0 877,334 + -0.2 877,335 - -0.5 877,335 - +0.7 877,335 - -0.2 877,335 - +0.4 877,399 + -0.4 877,399 + -0.5 877,400 - +0.4 877,400 - +0.8 877,400 - +0.8 877,414 + -0.2 877,414 + +0.1 877,414 + +1.2 877,414 + +0.0 877,414 + -1.6 877,415 - +0.2 877,415 - -1.2 877,415 - +0.2 877,415 - -0.2 877,415 - +0.6 877,415 - -1.8 877,423 + -0.4 877,423 + -0.3 877,423 + +0.6 877,424 - +0.1 877,424 - -2.7 877,447 + QEN71_RS03965 0.11 -0.2 877,447 + QEN71_RS03965 0.11 +0.1 877,447 + QEN71_RS03965 0.11 -0.4 877,447 + QEN71_RS03965 0.11 -1.3 877,447 + QEN71_RS03965 0.11 -0.8 877,447 + QEN71_RS03965 0.11 +0.1 877,447 + QEN71_RS03965 0.11 +0.8 877,447 + QEN71_RS03965 0.11 +0.2 877,447 + QEN71_RS03965 0.11 +0.3 877,447 + QEN71_RS03965 0.11 -1.6 877,448 - QEN71_RS03965 0.11 +1.0 877,448 - QEN71_RS03965 0.11 +0.7 877,448 - QEN71_RS03965 0.11 +1.3 877,448 - QEN71_RS03965 0.11 +1.0 877,448 - QEN71_RS03965 0.11 -0.3 877,549 + QEN71_RS03965 0.18 -0.5 877,549 + QEN71_RS03965 0.18 -0.2 877,550 - QEN71_RS03965 0.19 +0.7 877,550 - QEN71_RS03965 0.19 -0.4 877,550 - QEN71_RS03965 0.19 +1.1 877,735 + QEN71_RS03965 0.33 -1.2 877,735 + QEN71_RS03965 0.33 -0.1 877,735 + QEN71_RS03965 0.33 -1.2 877,735 + QEN71_RS03965 0.33 -1.3 877,736 - QEN71_RS03965 0.33 -0.0 877,736 - QEN71_RS03965 0.33 +1.4 877,736 - QEN71_RS03965 0.33 +0.1 877,736 - QEN71_RS03965 0.33 -0.6 877,736 - QEN71_RS03965 0.33 -0.2 877,736 - QEN71_RS03965 0.33 +1.1 877,774 + QEN71_RS03965 0.36 +1.2 877,774 + QEN71_RS03965 0.36 +1.2 877,774 + QEN71_RS03965 0.36 -0.1 877,774 + QEN71_RS03965 0.36 +1.2 877,774 + QEN71_RS03965 0.36 -0.1 877,774 + QEN71_RS03965 0.36 -0.5 877,775 - QEN71_RS03965 0.36 +0.4 877,775 - QEN71_RS03965 0.36 +0.1 877,775 - QEN71_RS03965 0.36 +0.5 877,775 - QEN71_RS03965 0.36 +1.8 878,049 + QEN71_RS03965 0.57 -1.2 878,049 + QEN71_RS03965 0.57 -0.3 878,049 + QEN71_RS03965 0.57 +0.4 878,077 + QEN71_RS03965 0.59 -0.4 878,077 + QEN71_RS03965 0.59 -0.5 878,077 + QEN71_RS03965 0.59 -0.7 878,077 + QEN71_RS03965 0.59 -1.1 878,077 + QEN71_RS03965 0.59 +0.8 878,077 + QEN71_RS03965 0.59 +0.5 878,078 - QEN71_RS03965 0.59 +0.2 878,078 - QEN71_RS03965 0.59 -0.2 878,078 - QEN71_RS03965 0.59 +1.8 878,078 - QEN71_RS03965 0.59 -0.0 878,078 - QEN71_RS03965 0.59 +0.1 878,092 + QEN71_RS03965 0.60 +0.3 878,092 + QEN71_RS03965 0.60 -0.8 878,093 - QEN71_RS03965 0.60 -0.2 878,093 - QEN71_RS03965 0.60 +0.7 878,093 - QEN71_RS03965 0.60 -1.5 878,093 - QEN71_RS03965 0.60 +0.1 878,139 + QEN71_RS03965 0.64 -0.5 878,139 + QEN71_RS03965 0.64 +1.1 878,140 - QEN71_RS03965 0.64 -1.0 878,140 - QEN71_RS03965 0.64 +0.0 878,269 + QEN71_RS03965 0.74 +0.1 878,269 + QEN71_RS03965 0.74 +1.1 878,269 + QEN71_RS03965 0.74 -0.5 878,270 - QEN71_RS03965 0.74 +0.8 878,270 - QEN71_RS03965 0.74 +0.5 878,347 + QEN71_RS03965 0.80 +0.0 878,348 - QEN71_RS03965 0.80 -1.6 878,356 + QEN71_RS03965 0.80 -1.6 878,356 + QEN71_RS03965 0.80 -0.7 878,357 - QEN71_RS03965 0.80 -0.1 878,357 - QEN71_RS03965 0.80 +1.3 878,431 + QEN71_RS03965 0.86 -0.6 878,431 + QEN71_RS03965 0.86 -0.5 878,432 - QEN71_RS03965 0.86 +0.0 878,432 - QEN71_RS03965 0.86 -2.2 878,432 - QEN71_RS03965 0.86 +1.5 878,479 + QEN71_RS03965 0.90 -0.4 878,479 + QEN71_RS03965 0.90 +0.8 878,479 + QEN71_RS03965 0.90 +1.4 878,479 + QEN71_RS03965 0.90 -0.7 878,479 + QEN71_RS03965 0.90 +0.6 878,479 + QEN71_RS03965 0.90 +0.4 878,480 - -0.7 878,480 - +0.0 878,480 - -0.8 878,480 - -0.7 878,480 - -0.3 878,570 - -1.3 878,570 - -0.4 878,885 + QEN71_RS03970 0.10 -0.5 878,886 - QEN71_RS03970 0.10 -0.2 879,205 + QEN71_RS03970 0.28 -1.0 879,553 + QEN71_RS03970 0.46 -0.7 879,553 + QEN71_RS03970 0.46 +1.8 879,554 - QEN71_RS03970 0.47 -1.2
Or see this region's nucleotide sequence