Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03855 and QEN71_RS03860 are separated by 31 nucleotides QEN71_RS03860 and QEN71_RS03865 overlap by 4 nucleotides QEN71_RS03865 and QEN71_RS03870 overlap by 1 nucleotides
QEN71_RS03855: QEN71_RS03855 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 851,658 to 852,839
_RS03855
QEN71_RS03860: QEN71_RS03860 - hotdog family protein, at 852,871 to 853,365
_RS03860
QEN71_RS03865: QEN71_RS03865 - 3-ketoacyl-ACP reductase FabG2, at 853,362 to 854,087
_RS03865
QEN71_RS03870: QEN71_RS03870 - beta-ketoacyl-ACP synthase, at 854,087 to 855,313
_RS03870
Position (kb) 852
853
854 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 852.045 kb on + strand, within QEN71_RS03855 at 852.045 kb on + strand, within QEN71_RS03855 at 852.046 kb on - strand, within QEN71_RS03855 at 852.046 kb on - strand, within QEN71_RS03855 at 852.046 kb on - strand, within QEN71_RS03855 at 852.172 kb on + strand, within QEN71_RS03855 at 852.173 kb on - strand, within QEN71_RS03855 at 852.218 kb on + strand, within QEN71_RS03855 at 852.495 kb on + strand, within QEN71_RS03855 at 852.496 kb on - strand, within QEN71_RS03855 at 852.496 kb on - strand, within QEN71_RS03855 at 852.777 kb on + strand at 852.778 kb on - strand at 852.827 kb on - strand at 852.827 kb on - strand at 852.827 kb on - strand at 852.864 kb on + strand at 852.864 kb on + strand at 852.864 kb on + strand at 852.921 kb on + strand, within QEN71_RS03860 at 852.922 kb on - strand, within QEN71_RS03860 at 853.030 kb on + strand, within QEN71_RS03860 at 853.030 kb on + strand, within QEN71_RS03860 at 853.030 kb on + strand, within QEN71_RS03860 at 853.168 kb on + strand, within QEN71_RS03860 at 853.168 kb on + strand, within QEN71_RS03860 at 853.169 kb on - strand, within QEN71_RS03860 at 853.169 kb on - strand, within QEN71_RS03860 at 853.169 kb on - strand, within QEN71_RS03860 at 853.169 kb on - strand, within QEN71_RS03860 at 853.259 kb on - strand, within QEN71_RS03860 at 853.354 kb on - strand at 853.354 kb on - strand at 853.354 kb on - strand at 853.420 kb on - strand at 853.602 kb on + strand, within QEN71_RS03865 at 853.602 kb on + strand, within QEN71_RS03865 at 853.602 kb on + strand, within QEN71_RS03865 at 853.605 kb on + strand, within QEN71_RS03865 at 853.605 kb on + strand, within QEN71_RS03865 at 853.606 kb on - strand, within QEN71_RS03865 at 853.707 kb on + strand, within QEN71_RS03865 at 853.707 kb on + strand, within QEN71_RS03865 at 853.707 kb on + strand, within QEN71_RS03865 at 853.707 kb on + strand, within QEN71_RS03865 at 853.708 kb on - strand, within QEN71_RS03865 at 853.708 kb on - strand, within QEN71_RS03865 at 853.818 kb on + strand, within QEN71_RS03865 at 853.819 kb on - strand, within QEN71_RS03865 at 853.819 kb on - strand, within QEN71_RS03865 at 853.819 kb on - strand, within QEN71_RS03865 at 853.819 kb on - strand, within QEN71_RS03865 at 853.940 kb on + strand, within QEN71_RS03865 at 853.940 kb on + strand, within QEN71_RS03865 at 853.940 kb on + strand, within QEN71_RS03865 at 853.940 kb on + strand, within QEN71_RS03865 at 854.043 kb on + strand at 854.044 kb on - strand at 854.044 kb on - strand at 854.044 kb on - strand at 854.044 kb on - strand at 854.208 kb on - strand at 854.312 kb on + strand, within QEN71_RS03870 at 854.312 kb on + strand, within QEN71_RS03870 at 854.312 kb on + strand, within QEN71_RS03870 at 854.312 kb on + strand, within QEN71_RS03870 at 854.312 kb on + strand, within QEN71_RS03870 at 854.312 kb on + strand, within QEN71_RS03870 at 854.312 kb on + strand, within QEN71_RS03870 at 854.312 kb on + strand, within QEN71_RS03870 at 854.313 kb on - strand, within QEN71_RS03870 at 854.313 kb on - strand, within QEN71_RS03870 at 854.313 kb on - strand, within QEN71_RS03870 at 854.313 kb on - strand, within QEN71_RS03870 at 854.313 kb on - strand, within QEN71_RS03870 at 854.313 kb on - strand, within QEN71_RS03870
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 852,045 + QEN71_RS03855 0.33 -1.1 852,045 + QEN71_RS03855 0.33 -0.5 852,046 - QEN71_RS03855 0.33 +1.3 852,046 - QEN71_RS03855 0.33 -0.6 852,046 - QEN71_RS03855 0.33 +0.6 852,172 + QEN71_RS03855 0.43 +1.0 852,173 - QEN71_RS03855 0.44 +0.8 852,218 + QEN71_RS03855 0.47 +0.3 852,495 + QEN71_RS03855 0.71 +0.2 852,496 - QEN71_RS03855 0.71 +0.6 852,496 - QEN71_RS03855 0.71 -0.9 852,777 + +1.2 852,778 - -0.3 852,827 - +0.0 852,827 - +1.2 852,827 - -0.5 852,864 + -0.0 852,864 + -0.3 852,864 + +0.6 852,921 + QEN71_RS03860 0.10 -0.7 852,922 - QEN71_RS03860 0.10 +0.4 853,030 + QEN71_RS03860 0.32 -0.3 853,030 + QEN71_RS03860 0.32 +0.4 853,030 + QEN71_RS03860 0.32 +0.4 853,168 + QEN71_RS03860 0.60 -0.2 853,168 + QEN71_RS03860 0.60 +0.5 853,169 - QEN71_RS03860 0.60 -0.7 853,169 - QEN71_RS03860 0.60 -0.1 853,169 - QEN71_RS03860 0.60 -1.2 853,169 - QEN71_RS03860 0.60 -1.1 853,259 - QEN71_RS03860 0.78 +1.6 853,354 - +0.4 853,354 - +1.1 853,354 - -0.3 853,420 - -0.1 853,602 + QEN71_RS03865 0.33 +0.7 853,602 + QEN71_RS03865 0.33 +0.3 853,602 + QEN71_RS03865 0.33 +0.4 853,605 + QEN71_RS03865 0.33 +0.8 853,605 + QEN71_RS03865 0.33 -0.3 853,606 - QEN71_RS03865 0.34 -0.3 853,707 + QEN71_RS03865 0.48 -0.2 853,707 + QEN71_RS03865 0.48 -0.7 853,707 + QEN71_RS03865 0.48 -1.2 853,707 + QEN71_RS03865 0.48 -1.1 853,708 - QEN71_RS03865 0.48 -0.2 853,708 - QEN71_RS03865 0.48 -1.5 853,818 + QEN71_RS03865 0.63 -1.2 853,819 - QEN71_RS03865 0.63 +1.3 853,819 - QEN71_RS03865 0.63 +0.7 853,819 - QEN71_RS03865 0.63 -3.1 853,819 - QEN71_RS03865 0.63 -0.1 853,940 + QEN71_RS03865 0.80 -0.3 853,940 + QEN71_RS03865 0.80 -0.8 853,940 + QEN71_RS03865 0.80 +0.3 853,940 + QEN71_RS03865 0.80 -0.1 854,043 + +0.4 854,044 - +0.0 854,044 - -0.2 854,044 - -0.3 854,044 - -0.3 854,208 - -0.0 854,312 + QEN71_RS03870 0.18 -0.4 854,312 + QEN71_RS03870 0.18 -0.5 854,312 + QEN71_RS03870 0.18 +0.8 854,312 + QEN71_RS03870 0.18 +0.8 854,312 + QEN71_RS03870 0.18 +0.9 854,312 + QEN71_RS03870 0.18 +0.8 854,312 + QEN71_RS03870 0.18 -0.4 854,312 + QEN71_RS03870 0.18 +0.6 854,313 - QEN71_RS03870 0.18 -1.0 854,313 - QEN71_RS03870 0.18 -2.0 854,313 - QEN71_RS03870 0.18 -0.3 854,313 - QEN71_RS03870 0.18 -0.6 854,313 - QEN71_RS03870 0.18 -1.3 854,313 - QEN71_RS03870 0.18 -0.4
Or see this region's nucleotide sequence