Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00290 and QEN71_RS00295 are separated by 237 nucleotides QEN71_RS00295 and QEN71_RS00300 are separated by 39 nucleotides QEN71_RS00300 and QEN71_RS00305 are separated by 187 nucleotides
QEN71_RS00290: QEN71_RS00290 - homoserine O-acetyltransferase, at 61,340 to 62,485
_RS00290
QEN71_RS00295: QEN71_RS00295 - nucleoid occlusion factor SlmA, at 62,723 to 63,406
_RS00295
QEN71_RS00300: QEN71_RS00300 - pyrimidine 5'-nucleotidase, at 63,446 to 64,201
_RS00300
QEN71_RS00305: QEN71_RS00305 - acetylglutamate kinase, at 64,389 to 65,288
_RS00305
Position (kb) 62
63
64 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 61.731 kb on + strand, within QEN71_RS00290 at 61.731 kb on + strand, within QEN71_RS00290 at 61.731 kb on + strand, within QEN71_RS00290 at 61.731 kb on + strand, within QEN71_RS00290 at 61.731 kb on + strand, within QEN71_RS00290 at 61.732 kb on - strand, within QEN71_RS00290 at 61.732 kb on - strand, within QEN71_RS00290 at 61.732 kb on - strand, within QEN71_RS00290 at 61.732 kb on - strand, within QEN71_RS00290 at 61.732 kb on - strand, within QEN71_RS00290 at 61.732 kb on - strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.803 kb on + strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.804 kb on - strand, within QEN71_RS00290 at 61.866 kb on + strand, within QEN71_RS00290 at 61.866 kb on + strand, within QEN71_RS00290 at 61.867 kb on - strand, within QEN71_RS00290 at 61.867 kb on - strand, within QEN71_RS00290 at 61.867 kb on - strand, within QEN71_RS00290 at 61.867 kb on - strand, within QEN71_RS00290 at 61.867 kb on - strand, within QEN71_RS00290 at 61.867 kb on - strand, within QEN71_RS00290 at 61.867 kb on - strand, within QEN71_RS00290 at 61.869 kb on + strand, within QEN71_RS00290 at 61.869 kb on + strand, within QEN71_RS00290 at 61.870 kb on - strand, within QEN71_RS00290 at 61.870 kb on - strand, within QEN71_RS00290 at 61.995 kb on + strand, within QEN71_RS00290 at 61.995 kb on + strand, within QEN71_RS00290 at 61.995 kb on + strand, within QEN71_RS00290 at 61.996 kb on - strand, within QEN71_RS00290 at 61.996 kb on - strand, within QEN71_RS00290 at 61.996 kb on - strand, within QEN71_RS00290 at 61.996 kb on - strand, within QEN71_RS00290 at 61.996 kb on - strand, within QEN71_RS00290 at 62.139 kb on + strand, within QEN71_RS00290 at 62.233 kb on + strand, within QEN71_RS00290 at 62.234 kb on - strand, within QEN71_RS00290 at 62.298 kb on + strand, within QEN71_RS00290 at 62.353 kb on + strand, within QEN71_RS00290 at 62.379 kb on + strand at 62.379 kb on + strand at 62.380 kb on - strand at 62.380 kb on - strand at 62.380 kb on - strand at 62.380 kb on - strand at 62.400 kb on + strand at 62.400 kb on + strand at 62.400 kb on + strand at 62.400 kb on + strand at 62.400 kb on + strand at 62.401 kb on - strand at 62.401 kb on - strand at 62.401 kb on - strand at 62.401 kb on - strand at 62.401 kb on - strand at 62.514 kb on - strand at 62.514 kb on - strand at 62.514 kb on - strand at 62.568 kb on - strand at 62.577 kb on + strand at 62.577 kb on + strand at 62.577 kb on + strand at 62.577 kb on + strand at 62.577 kb on + strand at 62.577 kb on + strand at 62.577 kb on + strand at 62.577 kb on + strand at 62.577 kb on + strand at 62.578 kb on - strand at 62.578 kb on - strand at 62.578 kb on - strand at 62.578 kb on - strand at 62.578 kb on - strand at 62.578 kb on - strand at 62.578 kb on - strand at 62.578 kb on - strand at 62.579 kb on + strand at 62.579 kb on + strand at 62.579 kb on + strand at 62.652 kb on - strand at 62.686 kb on + strand at 62.686 kb on + strand at 62.686 kb on + strand at 62.686 kb on + strand at 62.686 kb on + strand at 62.686 kb on + strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.687 kb on - strand at 62.689 kb on - strand at 62.724 kb on + strand at 62.725 kb on - strand at 62.725 kb on - strand at 62.817 kb on + strand, within QEN71_RS00295 at 62.817 kb on + strand, within QEN71_RS00295 at 62.817 kb on + strand, within QEN71_RS00295 at 62.817 kb on + strand, within QEN71_RS00295 at 62.817 kb on + strand, within QEN71_RS00295 at 62.817 kb on + strand, within QEN71_RS00295 at 62.817 kb on + strand, within QEN71_RS00295 at 62.817 kb on + strand, within QEN71_RS00295 at 62.817 kb on + strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.818 kb on - strand, within QEN71_RS00295 at 62.853 kb on + strand, within QEN71_RS00295 at 62.853 kb on + strand, within QEN71_RS00295 at 62.853 kb on + strand, within QEN71_RS00295 at 62.854 kb on - strand, within QEN71_RS00295 at 63.101 kb on + strand, within QEN71_RS00295 at 63.101 kb on + strand, within QEN71_RS00295 at 63.101 kb on + strand, within QEN71_RS00295 at 63.101 kb on + strand, within QEN71_RS00295 at 63.101 kb on + strand, within QEN71_RS00295 at 63.210 kb on + strand, within QEN71_RS00295 at 63.210 kb on + strand, within QEN71_RS00295 at 63.211 kb on - strand, within QEN71_RS00295 at 63.211 kb on - strand, within QEN71_RS00295 at 63.211 kb on - strand, within QEN71_RS00295 at 63.375 kb on - strand at 63.447 kb on + strand at 63.495 kb on - strand at 63.519 kb on + strand at 63.519 kb on + strand at 63.519 kb on + strand at 63.519 kb on + strand at 63.519 kb on + strand at 63.519 kb on + strand at 63.519 kb on + strand at 63.519 kb on + strand at 63.519 kb on + strand at 63.520 kb on - strand at 63.520 kb on - strand at 63.520 kb on - strand at 63.520 kb on - strand at 63.520 kb on - strand at 63.520 kb on - strand at 63.520 kb on - strand at 63.624 kb on + strand, within QEN71_RS00300 at 63.624 kb on + strand, within QEN71_RS00300 at 63.625 kb on - strand, within QEN71_RS00300 at 63.625 kb on - strand, within QEN71_RS00300 at 63.766 kb on + strand, within QEN71_RS00300 at 63.766 kb on + strand, within QEN71_RS00300 at 63.766 kb on + strand, within QEN71_RS00300 at 63.767 kb on - strand, within QEN71_RS00300 at 63.767 kb on - strand, within QEN71_RS00300 at 63.819 kb on + strand, within QEN71_RS00300 at 63.819 kb on + strand, within QEN71_RS00300 at 63.819 kb on + strand, within QEN71_RS00300 at 63.819 kb on + strand, within QEN71_RS00300 at 63.820 kb on - strand, within QEN71_RS00300 at 63.820 kb on - strand, within QEN71_RS00300 at 63.820 kb on - strand, within QEN71_RS00300 at 63.850 kb on + strand, within QEN71_RS00300 at 63.850 kb on + strand, within QEN71_RS00300 at 63.933 kb on + strand, within QEN71_RS00300 at 63.933 kb on + strand, within QEN71_RS00300 at 63.933 kb on + strand, within QEN71_RS00300 at 63.934 kb on - strand, within QEN71_RS00300 at 63.934 kb on - strand, within QEN71_RS00300 at 63.934 kb on - strand, within QEN71_RS00300 at 63.934 kb on - strand, within QEN71_RS00300 at 63.934 kb on - strand, within QEN71_RS00300 at 63.934 kb on - strand, within QEN71_RS00300 at 64.009 kb on - strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.065 kb on + strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.066 kb on - strand, within QEN71_RS00300 at 64.319 kb on + strand at 64.319 kb on + strand at 64.319 kb on + strand at 64.319 kb on + strand at 64.319 kb on + strand at 64.320 kb on - strand at 64.320 kb on - strand at 64.320 kb on - strand at 64.320 kb on - strand at 64.320 kb on - strand at 64.377 kb on - strand at 64.383 kb on - strand at 64.383 kb on - strand at 64.383 kb on - strand at 64.383 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 61,731 + QEN71_RS00290 0.34 -2.7 61,731 + QEN71_RS00290 0.34 -2.7 61,731 + QEN71_RS00290 0.34 -3.6 61,731 + QEN71_RS00290 0.34 -3.6 61,731 + QEN71_RS00290 0.34 -1.6 61,732 - QEN71_RS00290 0.34 -0.3 61,732 - QEN71_RS00290 0.34 -3.1 61,732 - QEN71_RS00290 0.34 -2.0 61,732 - QEN71_RS00290 0.34 -3.0 61,732 - QEN71_RS00290 0.34 -2.3 61,732 - QEN71_RS00290 0.34 -2.7 61,803 + QEN71_RS00290 0.40 -3.1 61,803 + QEN71_RS00290 0.40 -3.0 61,803 + QEN71_RS00290 0.40 -3.0 61,803 + QEN71_RS00290 0.40 -4.4 61,803 + QEN71_RS00290 0.40 -0.6 61,803 + QEN71_RS00290 0.40 -1.7 61,803 + QEN71_RS00290 0.40 -2.2 61,803 + QEN71_RS00290 0.40 -4.0 61,803 + QEN71_RS00290 0.40 -3.1 61,803 + QEN71_RS00290 0.40 -3.1 61,804 - QEN71_RS00290 0.40 -2.1 61,804 - QEN71_RS00290 0.40 -1.3 61,804 - QEN71_RS00290 0.40 -2.0 61,804 - QEN71_RS00290 0.40 -5.0 61,804 - QEN71_RS00290 0.40 -2.7 61,804 - QEN71_RS00290 0.40 -3.3 61,804 - QEN71_RS00290 0.40 -3.2 61,804 - QEN71_RS00290 0.40 -1.6 61,804 - QEN71_RS00290 0.40 -3.0 61,804 - QEN71_RS00290 0.40 -2.9 61,804 - QEN71_RS00290 0.40 -1.3 61,866 + QEN71_RS00290 0.46 -2.5 61,866 + QEN71_RS00290 0.46 -1.2 61,867 - QEN71_RS00290 0.46 -3.6 61,867 - QEN71_RS00290 0.46 -2.7 61,867 - QEN71_RS00290 0.46 -1.4 61,867 - QEN71_RS00290 0.46 -1.9 61,867 - QEN71_RS00290 0.46 -3.3 61,867 - QEN71_RS00290 0.46 -2.8 61,867 - QEN71_RS00290 0.46 -1.6 61,869 + QEN71_RS00290 0.46 -2.4 61,869 + QEN71_RS00290 0.46 -1.4 61,870 - QEN71_RS00290 0.46 -3.4 61,870 - QEN71_RS00290 0.46 -2.0 61,995 + QEN71_RS00290 0.57 -2.5 61,995 + QEN71_RS00290 0.57 -0.6 61,995 + QEN71_RS00290 0.57 -2.7 61,996 - QEN71_RS00290 0.57 -3.2 61,996 - QEN71_RS00290 0.57 -0.3 61,996 - QEN71_RS00290 0.57 -1.7 61,996 - QEN71_RS00290 0.57 -2.5 61,996 - QEN71_RS00290 0.57 -2.2 62,139 + QEN71_RS00290 0.70 -3.4 62,233 + QEN71_RS00290 0.78 -3.3 62,234 - QEN71_RS00290 0.78 -2.1 62,298 + QEN71_RS00290 0.84 -2.3 62,353 + QEN71_RS00290 0.88 -3.7 62,379 + -3.1 62,379 + -3.2 62,380 - -2.6 62,380 - -3.6 62,380 - -2.2 62,380 - -1.6 62,400 + -2.0 62,400 + -2.6 62,400 + -3.8 62,400 + -1.1 62,400 + -2.3 62,401 - -3.0 62,401 - -2.3 62,401 - -2.9 62,401 - -1.5 62,401 - -2.6 62,514 - -0.9 62,514 - -0.1 62,514 - -0.6 62,568 - -1.3 62,577 + -1.5 62,577 + -2.7 62,577 + -1.7 62,577 + -3.6 62,577 + -2.1 62,577 + -1.3 62,577 + -1.6 62,577 + -2.4 62,577 + -2.1 62,578 - +0.1 62,578 - -0.7 62,578 - -1.1 62,578 - -0.9 62,578 - -1.0 62,578 - -0.8 62,578 - +0.5 62,578 - +2.0 62,579 + -1.3 62,579 + -1.3 62,579 + -2.9 62,652 - -1.4 62,686 + -1.2 62,686 + -1.9 62,686 + -1.9 62,686 + -1.6 62,686 + -2.0 62,686 + -1.1 62,687 - +1.3 62,687 - -0.3 62,687 - +0.6 62,687 - +0.2 62,687 - -0.9 62,687 - -0.9 62,687 - +1.5 62,687 - -1.7 62,687 - -0.1 62,687 - -0.2 62,689 - -0.4 62,724 + +0.0 62,725 - -0.6 62,725 - +0.3 62,817 + QEN71_RS00295 0.14 -0.6 62,817 + QEN71_RS00295 0.14 -0.4 62,817 + QEN71_RS00295 0.14 +0.5 62,817 + QEN71_RS00295 0.14 -0.9 62,817 + QEN71_RS00295 0.14 -0.9 62,817 + QEN71_RS00295 0.14 -1.6 62,817 + QEN71_RS00295 0.14 -1.1 62,817 + QEN71_RS00295 0.14 +0.4 62,817 + QEN71_RS00295 0.14 -0.5 62,818 - QEN71_RS00295 0.14 +0.2 62,818 - QEN71_RS00295 0.14 -0.6 62,818 - QEN71_RS00295 0.14 -0.1 62,818 - QEN71_RS00295 0.14 -0.3 62,818 - QEN71_RS00295 0.14 -0.2 62,818 - QEN71_RS00295 0.14 +0.1 62,818 - QEN71_RS00295 0.14 +0.3 62,818 - QEN71_RS00295 0.14 +0.0 62,818 - QEN71_RS00295 0.14 -2.7 62,853 + QEN71_RS00295 0.19 -0.1 62,853 + QEN71_RS00295 0.19 -0.7 62,853 + QEN71_RS00295 0.19 +0.2 62,854 - QEN71_RS00295 0.19 +0.5 63,101 + QEN71_RS00295 0.55 -0.1 63,101 + QEN71_RS00295 0.55 -0.2 63,101 + QEN71_RS00295 0.55 -0.3 63,101 + QEN71_RS00295 0.55 -0.5 63,101 + QEN71_RS00295 0.55 -0.3 63,210 + QEN71_RS00295 0.71 +1.5 63,210 + QEN71_RS00295 0.71 +0.7 63,211 - QEN71_RS00295 0.71 -1.2 63,211 - QEN71_RS00295 0.71 -0.6 63,211 - QEN71_RS00295 0.71 +1.4 63,375 - +0.2 63,447 + -0.4 63,495 - -0.5 63,519 + -1.4 63,519 + -1.3 63,519 + -2.9 63,519 + +1.9 63,519 + -0.2 63,519 + -0.5 63,519 + -0.4 63,519 + -0.7 63,519 + +0.6 63,520 - -0.1 63,520 - -0.9 63,520 - -0.7 63,520 - +0.2 63,520 - +0.6 63,520 - -0.1 63,520 - +1.0 63,624 + QEN71_RS00300 0.24 -0.6 63,624 + QEN71_RS00300 0.24 -0.9 63,625 - QEN71_RS00300 0.24 +0.9 63,625 - QEN71_RS00300 0.24 -0.3 63,766 + QEN71_RS00300 0.42 +1.9 63,766 + QEN71_RS00300 0.42 +0.1 63,766 + QEN71_RS00300 0.42 +0.5 63,767 - QEN71_RS00300 0.42 +0.4 63,767 - QEN71_RS00300 0.42 -0.9 63,819 + QEN71_RS00300 0.49 +0.1 63,819 + QEN71_RS00300 0.49 +0.3 63,819 + QEN71_RS00300 0.49 +0.2 63,819 + QEN71_RS00300 0.49 -2.4 63,820 - QEN71_RS00300 0.49 +1.0 63,820 - QEN71_RS00300 0.49 +0.6 63,820 - QEN71_RS00300 0.49 +0.7 63,850 + QEN71_RS00300 0.53 -0.4 63,850 + QEN71_RS00300 0.53 -0.3 63,933 + QEN71_RS00300 0.64 -0.3 63,933 + QEN71_RS00300 0.64 -2.2 63,933 + QEN71_RS00300 0.64 +0.5 63,934 - QEN71_RS00300 0.65 -0.3 63,934 - QEN71_RS00300 0.65 -0.3 63,934 - QEN71_RS00300 0.65 -0.2 63,934 - QEN71_RS00300 0.65 -0.1 63,934 - QEN71_RS00300 0.65 -0.3 63,934 - QEN71_RS00300 0.65 -0.7 64,009 - QEN71_RS00300 0.74 -0.3 64,065 + QEN71_RS00300 0.82 +0.4 64,065 + QEN71_RS00300 0.82 +0.4 64,065 + QEN71_RS00300 0.82 -1.6 64,065 + QEN71_RS00300 0.82 -1.0 64,065 + QEN71_RS00300 0.82 +0.0 64,065 + QEN71_RS00300 0.82 -0.3 64,065 + QEN71_RS00300 0.82 +0.9 64,065 + QEN71_RS00300 0.82 +0.1 64,065 + QEN71_RS00300 0.82 -0.4 64,065 + QEN71_RS00300 0.82 +1.4 64,065 + QEN71_RS00300 0.82 +0.0 64,066 - QEN71_RS00300 0.82 -0.9 64,066 - QEN71_RS00300 0.82 -1.1 64,066 - QEN71_RS00300 0.82 -0.1 64,066 - QEN71_RS00300 0.82 +0.1 64,066 - QEN71_RS00300 0.82 -0.5 64,066 - QEN71_RS00300 0.82 +0.9 64,066 - QEN71_RS00300 0.82 -0.2 64,066 - QEN71_RS00300 0.82 -0.3 64,066 - QEN71_RS00300 0.82 -0.7 64,066 - QEN71_RS00300 0.82 -0.6 64,066 - QEN71_RS00300 0.82 +0.8 64,319 + -0.9 64,319 + -1.1 64,319 + +0.3 64,319 + -0.2 64,319 + +0.3 64,320 - +0.4 64,320 - +0.3 64,320 - +0.1 64,320 - -0.0 64,320 - +0.4 64,377 - +0.2 64,383 - +0.1 64,383 - -0.2 64,383 - -0.6 64,383 - -2.0
Or see this region's nucleotide sequence