Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04107

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
4,608,963	+				-0.3
4,608,963	+				-1.7
4,608,963	+				+0.2
4,608,963	+				-0.6
4,608,963	+				+0.4
4,608,963	+				-1.2
4,608,963	+				+2.8
4,608,963	+				+0.7
4,608,963	+				+0.8
4,608,963	+				+0.2
4,608,963	-				+0.3
4,608,971	-				+1.0
4,608,971	-				-0.3
4,608,971	-				-1.5
4,608,971	-				-0.5
4,608,971	-				-0.1
4,609,031	+		MIT1002_04106	0.11	-0.6
4,609,071	-		MIT1002_04106	0.17	-0.3
4,609,125	+		MIT1002_04106	0.26	-0.9
4,609,148	-		MIT1002_04106	0.29	-0.7
4,609,153	-		MIT1002_04106	0.30	-1.5
4,609,159	+		MIT1002_04106	0.31	-0.3
4,609,159	+		MIT1002_04106	0.31	+0.0
4,609,159	+		MIT1002_04106	0.31	-1.2
4,609,164	+		MIT1002_04106	0.32	+3.3
4,609,167	-		MIT1002_04106	0.32	+1.1
4,609,167	-		MIT1002_04106	0.32	+0.0
4,609,167	-		MIT1002_04106	0.32	+0.2
4,609,167	-		MIT1002_04106	0.32	+1.1
4,609,167	-		MIT1002_04106	0.32	-0.9
4,609,169	+		MIT1002_04106	0.33	-0.5
4,609,172	-		MIT1002_04106	0.33	-0.3
4,609,174	+		MIT1002_04106	0.33	-0.2
4,609,235	+		MIT1002_04106	0.43	-0.4
4,609,243	-		MIT1002_04106	0.44	+0.1
4,609,248	+		MIT1002_04106	0.45	+1.2
4,609,275	-		MIT1002_04106	0.49	+0.1
4,609,291	-		MIT1002_04106	0.52	-0.2
4,609,405	-		MIT1002_04106	0.69	-0.9
4,609,446	-		MIT1002_04106	0.76	-0.0
4,609,557	-				+1.1
4,609,816	-				+0.1
4,609,831	-				+0.2
4,609,850	+				-0.3
4,609,855	+				-0.1
4,609,858	-				+0.2
4,609,858	-				-0.8
4,609,904	+				-0.5
4,609,912	-				-1.0
4,609,920	+				-0.1
4,609,923	-				-1.1
4,609,923	-				+0.1
4,609,948	+				-0.6
4,609,992	-				+0.6
4,609,997	-				-0.5
4,610,128	+		MIT1002_04107	0.15	-0.1
4,610,134	-		MIT1002_04107	0.15	+0.3
4,610,204	-		MIT1002_04107	0.21	-0.9
4,610,206	-		MIT1002_04107	0.21	-0.5
4,610,232	+		MIT1002_04107	0.23	+0.6
4,610,302	-		MIT1002_04107	0.29	+0.3
4,610,302	-		MIT1002_04107	0.29	-0.0
4,610,304	-		MIT1002_04107	0.29	-0.3
4,610,334	-		MIT1002_04107	0.32	+0.1
4,610,347	+		MIT1002_04107	0.33	+0.3
4,610,375	+		MIT1002_04107	0.35	+0.8
4,610,383	-		MIT1002_04107	0.36	+1.5
4,610,394	+		MIT1002_04107	0.37	-0.3
4,610,394	+		MIT1002_04107	0.37	+0.3
4,610,398	-		MIT1002_04107	0.37	+0.2
4,610,398	-		MIT1002_04107	0.37	+0.2
4,610,402	-		MIT1002_04107	0.38	-0.3
4,610,402	-		MIT1002_04107	0.38	-0.1
4,610,402	-		MIT1002_04107	0.38	+1.6
4,610,480	-		MIT1002_04107	0.44	-0.1
4,610,528	-		MIT1002_04107	0.48	-0.8
4,610,599	-		MIT1002_04107	0.54	-3.0
4,610,610	-		MIT1002_04107	0.55	+0.6
4,610,633	-		MIT1002_04107	0.57	-0.7
4,610,635	-		MIT1002_04107	0.57	-0.1
4,610,665	+		MIT1002_04107	0.59	-0.2
4,610,714	+		MIT1002_04107	0.64	+0.3
4,610,864	+		MIT1002_04107	0.76	+3.1
4,610,921	-		MIT1002_04107	0.81	-0.0
4,610,962	-		MIT1002_04107	0.84	-0.9
4,610,978	+		MIT1002_04107	0.86	-1.3
4,611,063	-				+0.4
4,611,063	-				-0.9
4,611,216	+				+0.2
4,611,235	+				+1.4
4,611,245	-				+0.2
4,611,298	+		MIT1002_04108	0.24	+0.0
4,611,340	+		MIT1002_04108	0.36	-0.5
4,611,404	-		MIT1002_04108	0.55	-0.1
4,611,418	+		MIT1002_04108	0.59	+0.4
4,611,551	-				+0.2
4,611,557	+				-0.0
4,611,565	-				+1.6
4,611,582	-				-0.0
4,611,654	-				-0.3
4,611,656	+				+0.9
4,611,656	+				-0.6
4,611,664	-				-0.9
4,611,666	-				+0.2
4,611,692	+				+1.9
4,611,692	+				-1.2
4,611,692	+				-0.4
4,611,692	+				-1.1
4,611,698	-		MIT1002_04109	0.11	-0.9
4,611,698	-		MIT1002_04109	0.11	+0.8
4,611,700	-		MIT1002_04109	0.11	+0.7
4,611,700	-		MIT1002_04109	0.11	+1.3
4,611,700	-		MIT1002_04109	0.11	-0.5
4,611,700	-		MIT1002_04109	0.11	-0.9
4,611,700	-		MIT1002_04109	0.11	-0.8
4,611,711	+		MIT1002_04109	0.13	-0.0
4,611,811	-		MIT1002_04109	0.30	+0.1
4,611,839	-		MIT1002_04109	0.35	+0.9
4,611,885	+		MIT1002_04109	0.43	+0.3
4,611,890	+		MIT1002_04109	0.44	+0.5
4,611,892	+		MIT1002_04109	0.44	-0.1
4,611,893	-		MIT1002_04109	0.44	+0.5
4,611,898	-		MIT1002_04109	0.45	+1.2
4,611,927	-		MIT1002_04109	0.50	-0.0
4,611,993	-		MIT1002_04109	0.61	-1.3
4,612,088	+		MIT1002_04109	0.78	+0.4
4,612,088	+		MIT1002_04109	0.78	+0.2
4,612,096	-		MIT1002_04109	0.79	-2.1
4,612,113	+		MIT1002_04109	0.82	+1.4
4,612,113	+		MIT1002_04109	0.82	-0.5
4,612,124	-		MIT1002_04109	0.84	-1.8
4,612,148	+		MIT1002_04109	0.88	-0.2