Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04011

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
4,495,662	+				-0.2
4,495,687	+				+1.7
4,495,820	-				-0.8
4,495,951	+				-0.2
4,495,953	+				-0.5
4,495,968	+				+0.4
4,495,976	+		MIT1002_04010	0.11	-1.0
4,495,976	-		MIT1002_04010	0.11	-2.0
4,495,983	+		MIT1002_04010	0.14	+1.5
4,495,990	-		MIT1002_04010	0.17	-0.1
4,495,991	-		MIT1002_04010	0.17	-0.6
4,496,028	+		MIT1002_04010	0.32	-0.2
4,496,029	-		MIT1002_04010	0.32	-1.5
4,496,071	+		MIT1002_04010	0.49	-2.3
4,496,077	-		MIT1002_04010	0.51	+0.3
4,496,107	+		MIT1002_04010	0.63	-1.8
4,496,113	-		MIT1002_04010	0.65	-1.2
4,496,113	-		MIT1002_04010	0.65	-2.7
4,496,233	-				+0.0
4,496,358	-				-0.1
4,496,409	-				-0.3
4,496,423	+				-1.5
4,496,431	-				+2.1
4,496,498	-		MIT1002_04011	0.22	+1.1
4,496,504	+		MIT1002_04011	0.23	+0.6
4,496,603	+		MIT1002_04011	0.43	-0.2
4,496,611	-		MIT1002_04011	0.45	-0.3
4,496,697	+		MIT1002_04011	0.63	-0.1
4,496,765	+		MIT1002_04011	0.77	-1.2
4,496,883	+				+0.3
4,496,889	-				+0.1
4,496,891	-				+0.4
4,496,901	-				+2.1
4,496,910	-				-0.7
4,496,985	+				+0.9
4,496,991	-				-0.2
4,496,993	-				-0.7
4,497,162	+				+0.3
4,497,183	+				-0.0
4,497,199	+				+0.1
4,497,207	+				+1.1
4,497,207	+				-1.2
4,497,207	+				-0.9
4,497,215	-				-0.5
4,497,215	-				-0.3
4,497,215	-				-0.8
4,497,215	-				-1.3
4,497,217	+				-1.1
4,497,237	+				-2.7
4,497,245	-				-0.8
4,497,255	+				+0.7
4,497,310	-		MIT1002_04012	0.11	+1.3
4,497,355	-		MIT1002_04012	0.13	-0.3
4,497,408	+		MIT1002_04012	0.15	-0.6
4,497,408	+		MIT1002_04012	0.15	-1.9
4,497,408	+		MIT1002_04012	0.15	+0.4
4,497,417	-		MIT1002_04012	0.15	-0.8
4,497,463	-		MIT1002_04012	0.17	+0.5
4,497,486	-		MIT1002_04012	0.18	+0.7
4,497,515	+		MIT1002_04012	0.20	-0.1
4,497,523	-		MIT1002_04012	0.20	+1.7
4,497,570	-		MIT1002_04012	0.22	-1.6
4,497,634	-		MIT1002_04012	0.25	+1.2
4,497,674	-		MIT1002_04012	0.26	+0.2
4,497,721	+		MIT1002_04012	0.28	+0.3
4,497,765	-		MIT1002_04012	0.30	-0.3
4,497,784	+		MIT1002_04012	0.31	-0.1
4,497,828	+		MIT1002_04012	0.33	-0.2