Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03433

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
3,835,457	+		MIT1002_03431	0.81	+0.4
3,835,470	-		MIT1002_03431	0.82	+0.1
3,835,473	-		MIT1002_03431	0.82	-0.3
3,835,490	-		MIT1002_03431	0.83	+0.4
3,835,490	-		MIT1002_03431	0.83	-0.6
3,835,515	+		MIT1002_03431	0.84	-0.4
3,835,593	-		MIT1002_03431	0.88	-0.0
3,835,624	-				-0.2
3,835,747	+				+0.1
3,835,755	-				+1.4
3,835,762	-				-0.4
3,835,768	+				+0.6
3,835,807	+				-0.7
3,836,355	+				+0.1
3,836,393	+				-0.3
3,836,402	-				-0.5
3,836,436	+				-0.4
3,836,456	-				+0.0
3,836,514	-		MIT1002_03433	0.16	-0.1
3,836,603	+		MIT1002_03433	0.28	+0.7
3,836,603	+		MIT1002_03433	0.28	-0.0
3,836,661	+		MIT1002_03433	0.35	-0.0
3,836,669	+		MIT1002_03433	0.36	-0.3
3,836,669	+		MIT1002_03433	0.36	-0.5
3,836,669	+		MIT1002_03433	0.36	-2.6
3,836,669	+		MIT1002_03433	0.36	+1.3
3,836,669	+		MIT1002_03433	0.36	+0.1
3,836,671	+		MIT1002_03433	0.36	-1.0
3,836,677	-		MIT1002_03433	0.37	-1.2
3,836,677	-		MIT1002_03433	0.37	+0.5
3,836,677	-		MIT1002_03433	0.37	-0.1
3,836,679	-		MIT1002_03433	0.37	-1.2
3,836,679	-		MIT1002_03433	0.37	-0.7
3,836,731	-		MIT1002_03433	0.44	+0.9
3,836,755	+		MIT1002_03433	0.47	+0.3
3,836,784	-		MIT1002_03433	0.51	-1.1
3,836,807	+		MIT1002_03433	0.53	+1.6
3,837,223	-				+0.3
3,837,630	+		MIT1002_03434	0.76	-2.2
3,837,886	-				+0.7
3,837,888	-				+0.5
3,837,888	-				+0.7
3,837,896	-				+0.1
3,837,924	+				-1.0
3,837,934	+				-2.4
3,837,935	-				+0.8
3,837,959	+				+0.1
3,837,961	+				+0.5
3,837,961	+				-0.2
3,838,069	-		MIT1002_03435	0.11	+0.9
3,838,133	+		MIT1002_03435	0.16	-0.5
3,838,166	-		MIT1002_03435	0.18	-0.6