Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03411

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
3,812,547	+				-0.5
3,812,560	-				-0.5
3,812,589	-				+0.0
3,812,624	-				+1.7
3,812,630	-				-1.0
3,812,645	+		MIT1002_03410	0.11	-0.5
3,812,653	-		MIT1002_03410	0.12	-1.3
3,812,667	+		MIT1002_03410	0.14	-0.1
3,812,680	-		MIT1002_03410	0.16	+1.1
3,812,686	+		MIT1002_03410	0.16	+1.3
3,812,831	-		MIT1002_03410	0.37	+0.3
3,812,832	+		MIT1002_03410	0.37	-0.7
3,812,907	-		MIT1002_03410	0.47	-0.0
3,812,907	-		MIT1002_03410	0.47	-0.1
3,812,947	+		MIT1002_03410	0.53	+0.9
3,813,039	-		MIT1002_03410	0.66	+1.3
3,813,056	-		MIT1002_03410	0.68	-0.1
3,813,069	+		MIT1002_03410	0.70	-0.0
3,813,081	+		MIT1002_03410	0.72	+0.3
3,813,081	+		MIT1002_03410	0.72	+1.1
3,813,089	-		MIT1002_03410	0.73	+0.6
3,813,114	+		MIT1002_03410	0.76	+0.6
3,813,142	-		MIT1002_03410	0.80	+0.7
3,813,157	+		MIT1002_03410	0.82	-0.2
3,813,161	+		MIT1002_03410	0.83	-0.9
3,813,177	+		MIT1002_03410	0.85	-0.1
3,813,180	+		MIT1002_03410	0.85	-0.6
3,813,180	+		MIT1002_03410	0.85	+0.5
3,813,187	-		MIT1002_03410	0.86	+0.3
3,813,188	-		MIT1002_03410	0.86	+0.2
3,813,188	-		MIT1002_03410	0.86	+0.3
3,813,194	-		MIT1002_03410	0.87	+0.3
3,813,198	+		MIT1002_03410	0.88	+0.8
3,813,199	-		MIT1002_03410	0.88	+0.2
3,813,249	+				+0.9
3,813,249	+				-0.1
3,813,257	-				-0.3
3,813,257	-				-0.4
3,813,257	-				+1.0
3,813,267	-				-0.7
3,813,400	+				+0.3
3,813,402	+				+0.9
3,813,413	-				+1.0
3,813,413	-				+0.2
3,813,442	+				+0.1
3,813,442	+				-1.0
3,813,450	-				-3.5
3,813,575	-		MIT1002_03411	0.28	-0.7
3,813,667	-		MIT1002_03411	0.63	+0.2
3,813,670	-		MIT1002_03411	0.64	+0.0
3,813,727	-		MIT1002_03411	0.86	-2.1
3,813,744	-				-3.6
3,813,796	-				-0.4
3,813,909	+				-1.4
3,814,046	-				-0.0
3,814,056	+				-0.1
3,814,057	+				+1.1
3,814,083	-				-0.8
3,814,109	+				+0.1
3,814,110	-				+0.9
3,814,112	-				+2.6
3,814,195	+				+0.9
3,814,277	+				+1.1
3,814,330	+				-0.2
3,814,372	+				-0.6
3,814,387	-				+0.3
3,814,404	-				-1.6
3,814,451	+				-2.7
3,814,480	+		MIT1002_03412	0.11	-1.0
3,814,536	+		MIT1002_03412	0.21	-0.1
3,814,556	-		MIT1002_03412	0.24	-0.5
3,814,556	-		MIT1002_03412	0.24	-0.4
3,814,556	-		MIT1002_03412	0.24	-0.1
3,814,562	+		MIT1002_03412	0.26	-1.0
3,814,562	+		MIT1002_03412	0.26	-0.5
3,814,569	+		MIT1002_03412	0.27	-0.6
3,814,570	-		MIT1002_03412	0.27	-0.7
3,814,590	+		MIT1002_03412	0.31	-1.0
3,814,598	-		MIT1002_03412	0.32	-0.5
3,814,673	+		MIT1002_03412	0.46	-0.8
3,814,683	+		MIT1002_03412	0.47	-2.0
3,814,718	+		MIT1002_03412	0.54	-0.2