Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03338

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
3,727,679	+				-0.2
3,727,689	-		MIT1002_03337	0.12	+1.4
3,727,730	-		MIT1002_03337	0.19	-0.8
3,727,736	-		MIT1002_03337	0.20	-0.0
3,727,791	-		MIT1002_03337	0.30	+0.5
3,727,796	-		MIT1002_03337	0.31	-1.1
3,727,797	-		MIT1002_03337	0.31	+1.4
3,727,806	+		MIT1002_03337	0.33	-0.3
3,727,840	+		MIT1002_03337	0.39	-1.2
3,727,879	-		MIT1002_03337	0.47	+0.1
3,727,902	+		MIT1002_03337	0.51	+0.1
3,727,907	-		MIT1002_03337	0.52	+0.1
3,727,985	+		MIT1002_03337	0.66	+2.0
3,727,994	-		MIT1002_03337	0.68	+1.2
3,728,062	-		MIT1002_03337	0.80	-0.8
3,728,063	-		MIT1002_03337	0.80	+0.9
3,728,085	-		MIT1002_03337	0.85	+0.5
3,728,095	-		MIT1002_03337	0.86	-0.8
3,728,171	-				-0.2
3,728,177	+				+0.8
3,728,180	+				+0.2
3,728,180	+				-0.8
3,728,180	+				-0.4
3,728,180	+				+0.7
3,728,180	+				+1.5
3,728,180	+				+0.2
3,728,180	+				+0.8
3,728,186	-				+0.8
3,728,188	-				+1.3
3,728,188	-				-0.6
3,728,190	+				+0.7
3,728,200	+				-0.5
3,728,322	-				-0.4
3,728,396	-				-0.7
3,728,443	+				+0.1
3,728,561	-				+0.2
3,728,585	-				+0.2
3,728,675	-				-0.7
3,728,675	-				+1.0
3,728,682	-				+0.1
3,728,690	-				+0.2
3,728,744	-				+1.0
3,728,802	-				-0.9
3,728,839	+				+0.4
3,728,840	+				+0.3
3,728,960	+		MIT1002_03338	0.14	-2.0
3,729,011	+		MIT1002_03338	0.16	-3.0
3,729,011	+		MIT1002_03338	0.16	+0.1
3,729,019	-		MIT1002_03338	0.16	+0.4
3,729,021	+		MIT1002_03338	0.16	+0.7
3,729,066	-		MIT1002_03338	0.18	-0.8
3,729,126	+		MIT1002_03338	0.20	-2.3
3,729,135	+		MIT1002_03338	0.20	-0.3
3,729,143	-		MIT1002_03338	0.21	-1.3
3,729,143	-		MIT1002_03338	0.21	-1.6
3,729,161	+		MIT1002_03338	0.21	-0.5
3,729,169	-		MIT1002_03338	0.22	+0.6
3,729,248	+		MIT1002_03338	0.25	-1.0
3,729,248	+		MIT1002_03338	0.25	+1.2
3,729,248	+		MIT1002_03338	0.25	-0.3
3,729,331	+		MIT1002_03338	0.28	+1.0
3,729,409	+		MIT1002_03338	0.31	-0.0
3,729,452	-		MIT1002_03338	0.33	-0.1
3,729,463	+		MIT1002_03338	0.33	+0.5
3,729,471	-		MIT1002_03338	0.34	-0.3
3,729,474	+		MIT1002_03338	0.34	+0.2
3,729,578	-		MIT1002_03338	0.38	+0.8
3,729,587	-		MIT1002_03338	0.38	-0.4
3,729,659	+		MIT1002_03338	0.41	+0.5
3,729,669	+		MIT1002_03338	0.42	+0.2
3,729,694	+		MIT1002_03338	0.43	-0.0
3,729,730	-		MIT1002_03338	0.44	-0.4
3,729,730	-		MIT1002_03338	0.44	+0.2
3,729,730	-		MIT1002_03338	0.44	-2.2
3,729,735	-		MIT1002_03338	0.44	-0.5
3,729,755	+		MIT1002_03338	0.45	-0.1
3,729,758	-		MIT1002_03338	0.45	+0.4
3,729,798	-		MIT1002_03338	0.47	-0.7
3,729,798	-		MIT1002_03338	0.47	+0.5
3,729,864	+		MIT1002_03338	0.49	+1.8
3,729,874	-		MIT1002_03338	0.50	+2.4
3,729,879	+		MIT1002_03338	0.50	+0.6
3,729,879	+		MIT1002_03338	0.50	-0.3
3,729,887	-		MIT1002_03338	0.50	+0.7
3,729,887	-		MIT1002_03338	0.50	-1.9
3,729,898	-		MIT1002_03338	0.51	-1.4
3,729,933	-		MIT1002_03338	0.52	+0.0
3,729,978	-		MIT1002_03338	0.54	-0.2
3,729,988	-		MIT1002_03338	0.54	-0.3
3,729,988	-		MIT1002_03338	0.54	+0.7
3,730,014	+		MIT1002_03338	0.55	+0.5
3,730,019	+		MIT1002_03338	0.55	-1.1
3,730,019	+		MIT1002_03338	0.55	+0.2
3,730,019	+		MIT1002_03338	0.55	-0.2
3,730,020	+		MIT1002_03338	0.56	+0.2
3,730,020	+		MIT1002_03338	0.56	-0.9
3,730,027	-		MIT1002_03338	0.56	+1.1
3,730,097	-		MIT1002_03338	0.59	-1.1
3,730,141	+		MIT1002_03338	0.60	+0.0
3,730,141	+		MIT1002_03338	0.60	-0.4
3,730,149	-		MIT1002_03338	0.61	+0.7
3,730,149	-		MIT1002_03338	0.61	+0.7
3,730,170	-		MIT1002_03338	0.61	-0.7
3,730,192	+		MIT1002_03338	0.62	-0.2
3,730,192	+		MIT1002_03338	0.62	+0.2
3,730,192	+		MIT1002_03338	0.62	-1.4
3,730,193	-		MIT1002_03338	0.62	-0.1
3,730,193	-		MIT1002_03338	0.62	+2.5
3,730,200	-		MIT1002_03338	0.63	-0.5
3,730,200	-		MIT1002_03338	0.63	-1.8
3,730,245	-		MIT1002_03338	0.64	-0.2
3,730,264	+		MIT1002_03338	0.65	+1.0
3,730,310	-		MIT1002_03338	0.67	-0.5
3,730,326	+		MIT1002_03338	0.68	+0.2
3,730,349	-		MIT1002_03338	0.69	+2.2
3,730,388	-		MIT1002_03338	0.70	+2.2
3,730,402	-		MIT1002_03338	0.71	+0.1
3,730,413	-		MIT1002_03338	0.71	+0.2
3,730,418	+		MIT1002_03338	0.71	+0.6
3,730,426	-		MIT1002_03338	0.72	-1.3
3,730,447	+		MIT1002_03338	0.72	+1.4
3,730,455	-		MIT1002_03338	0.73	+1.8
3,730,455	-		MIT1002_03338	0.73	-0.2
3,730,457	+		MIT1002_03338	0.73	+0.2
3,730,457	+		MIT1002_03338	0.73	+0.5
3,730,457	+		MIT1002_03338	0.73	+0.0
3,730,465	-		MIT1002_03338	0.73	+0.6
3,730,517	+		MIT1002_03338	0.75	-0.7
3,730,525	-		MIT1002_03338	0.76	-0.2
3,730,565	-		MIT1002_03338	0.77	-0.6
3,730,618	+		MIT1002_03338	0.79	+0.9
3,730,631	-		MIT1002_03338	0.80	+0.5
3,730,633	+		MIT1002_03338	0.80	+0.4
3,730,648	+		MIT1002_03338	0.80	-2.1
3,730,648	+		MIT1002_03338	0.80	+1.4
3,730,656	-		MIT1002_03338	0.81	+0.4
3,730,656	-		MIT1002_03338	0.81	+0.1
3,730,658	+		MIT1002_03338	0.81	+0.2
3,730,666	-		MIT1002_03338	0.81	-0.6
3,730,749	+		MIT1002_03338	0.84	-0.2
3,730,825	+		MIT1002_03338	0.87	-1.8
3,730,831	+		MIT1002_03338	0.88	-0.2
3,730,831	+		MIT1002_03338	0.88	+0.2
3,730,831	+		MIT1002_03338	0.88	-0.6
3,730,833	-		MIT1002_03338	0.88	+1.2
3,730,833	-		MIT1002_03338	0.88	-0.3
3,730,833	-		MIT1002_03338	0.88	-1.1
3,730,839	-		MIT1002_03338	0.88	+0.0
3,730,862	-		MIT1002_03338	0.89	-0.7
3,730,929	-				-0.5
3,730,929	-				+0.2
3,730,931	-				+2.7
3,730,934	-				-0.7
3,731,068	+				+0.3
3,731,083	+				+0.9
3,731,113	+				+0.2
3,731,118	+				-0.4
3,731,122	-				-1.6
3,731,126	-				+2.3
3,731,128	+				-0.9
3,731,128	+				-0.1
3,731,135	+				+0.3
3,731,136	+				-0.5
3,731,143	-				-0.5
3,731,168	+				-1.1
3,731,168	+				+0.3
3,731,268	+				-0.6
3,731,268	+				+0.3
3,731,413	+		MIT1002_03339	0.10	-0.3
3,731,421	-		MIT1002_03339	0.11	-0.3
3,731,455	-		MIT1002_03339	0.16	+0.5
3,731,483	+		MIT1002_03339	0.21	+1.3
3,731,483	+		MIT1002_03339	0.21	+1.0
3,731,518	-		MIT1002_03339	0.26	+1.6
3,731,576	+		MIT1002_03339	0.35	+0.2
3,731,576	+		MIT1002_03339	0.35	-1.9
3,731,584	-		MIT1002_03339	0.36	-1.4
3,731,584	-		MIT1002_03339	0.36	-1.1
3,731,584	-		MIT1002_03339	0.36	+1.8
3,731,643	-		MIT1002_03339	0.45	+0.2
3,731,684	+		MIT1002_03339	0.51	-0.6
3,731,765	+		MIT1002_03339	0.64	+0.2
3,731,765	+		MIT1002_03339	0.64	+0.2
3,731,765	+		MIT1002_03339	0.64	-0.6
3,731,765	+		MIT1002_03339	0.64	+1.2
3,731,765	+		MIT1002_03339	0.64	-1.3
3,731,765	+		MIT1002_03339	0.64	+0.5
3,731,765	+		MIT1002_03339	0.64	-0.7
3,731,765	+		MIT1002_03339	0.64	+0.5
3,731,765	+		MIT1002_03339	0.64	+1.2
3,731,765	+		MIT1002_03339	0.64	-0.9
3,731,773	-		MIT1002_03339	0.65	+0.0
3,731,773	-		MIT1002_03339	0.65	+0.2
3,731,773	-		MIT1002_03339	0.65	-1.0
3,731,773	-		MIT1002_03339	0.65	-1.1
3,731,773	-		MIT1002_03339	0.65	+1.0
3,731,773	-		MIT1002_03339	0.65	+0.1
3,731,773	-		MIT1002_03339	0.65	-0.3
3,731,773	-		MIT1002_03339	0.65	+0.7
3,731,773	-		MIT1002_03339	0.65	+0.5
3,731,773	-		MIT1002_03339	0.65	-1.7
3,731,773	-		MIT1002_03339	0.65	-0.4
3,731,773	-		MIT1002_03339	0.65	-1.2
3,731,773	-		MIT1002_03339	0.65	+0.6
3,731,773	-		MIT1002_03339	0.65	+1.1
3,731,773	-		MIT1002_03339	0.65	+1.4
3,731,879	+		MIT1002_03339	0.81	+0.0
3,731,925	+		MIT1002_03339	0.88	-0.1
3,731,933	-		MIT1002_03339	0.89	+0.4
3,731,960	+				-1.2
3,731,979	-				-1.0
3,732,045	+				-0.6
3,732,046	+				+1.0
3,732,050	+				-1.9
3,732,058	-				+1.0
3,732,058	-				-0.0
3,732,065	+				-0.4
3,732,065	+				+0.0
3,732,073	-				+1.0
3,732,073	-				+1.5
3,732,073	-				-0.4
3,732,073	-				-0.3
3,732,073	-				+0.1
3,732,073	-				-0.4
3,732,139	-				+1.0