Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03166

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
3,527,979	+				-0.4
3,528,027	+				-3.4
3,528,106	-		MIT1002_03165	0.18	-1.1
3,528,155	-		MIT1002_03165	0.24	-0.1
3,528,364	-		MIT1002_03165	0.50	+0.4
3,528,364	-		MIT1002_03165	0.50	+1.0
3,528,379	-		MIT1002_03165	0.52	+0.5
3,528,402	-		MIT1002_03165	0.55	-1.4
3,528,456	-		MIT1002_03165	0.61	+0.8
3,528,628	+		MIT1002_03165	0.82	-1.1
3,528,636	-		MIT1002_03165	0.83	+0.1
3,528,699	-				+0.4
3,528,780	+				-0.8
3,528,819	-				-1.6
3,528,819	-				+0.9
3,528,819	-				+0.6
3,528,819	-				+0.5
3,528,861	-				-0.8
3,528,863	+				-0.5
3,529,027	+		MIT1002_03166	0.29	+0.5
3,529,035	-		MIT1002_03166	0.30	+0.5
3,529,035	-		MIT1002_03166	0.30	-0.8
3,529,064	+		MIT1002_03166	0.34	+0.4
3,529,064	+		MIT1002_03166	0.34	+1.4
3,529,095	+		MIT1002_03166	0.38	+0.0
3,529,098	-		MIT1002_03166	0.38	-0.6
3,529,098	-		MIT1002_03166	0.38	+0.4
3,529,258	+		MIT1002_03166	0.58	+0.4
3,529,312	-		MIT1002_03166	0.65	+1.1
3,529,330	+		MIT1002_03166	0.68	+0.7
3,529,331	-		MIT1002_03166	0.68	+1.2
3,529,353	+		MIT1002_03166	0.71	-0.4
3,529,361	-		MIT1002_03166	0.72	+0.9
3,529,395	+		MIT1002_03166	0.76	+1.0
3,529,413	+		MIT1002_03166	0.78	-0.8
3,529,421	-		MIT1002_03166	0.79	+0.0
3,529,465	-		MIT1002_03166	0.85	+0.3
3,529,531	+				+1.1
3,529,534	+				-0.7
3,529,536	+				+1.2
3,529,544	-				-0.0
3,529,544	-				+0.2
3,529,544	-				+0.8
3,529,544	-				-0.8
3,529,544	-				+0.1
3,529,548	+				-0.0
3,529,618	-				-0.9
3,529,666	-				-0.6
3,529,676	-				+0.7
3,529,733	+				+0.6
3,529,734	-				-0.1
3,529,736	-				-0.9
3,529,741	-				-0.2
3,529,741	-				-0.9
3,529,741	-				-0.4
3,529,754	+				-0.1
3,529,772	+				-0.3
3,529,782	+				+0.4
3,529,791	-				-0.5
3,529,981	+				-0.2
3,530,062	+				+0.8
3,530,083	+		MIT1002_03167	0.11	-0.0
3,530,103	-		MIT1002_03167	0.12	+0.4
3,530,162	-		MIT1002_03167	0.17	-0.9
3,530,196	-		MIT1002_03167	0.19	+0.9
3,530,299	+		MIT1002_03167	0.26	+0.3
3,530,317	-		MIT1002_03167	0.28	-1.0
3,530,363	+		MIT1002_03167	0.31	+0.2
3,530,401	-		MIT1002_03167	0.34	+0.2
3,530,410	-		MIT1002_03167	0.35	+0.5
3,530,444	-		MIT1002_03167	0.37	+0.6
3,530,496	-		MIT1002_03167	0.41	+0.4
3,530,504	-		MIT1002_03167	0.41	-1.9
3,530,511	-		MIT1002_03167	0.42	+0.6
3,530,546	+		MIT1002_03167	0.44	+0.5
3,530,578	-		MIT1002_03167	0.47	+1.2