Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03122

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
3,474,591	+				-0.2
3,474,633	-				+1.0
3,474,782	+		MIT1002_03120	0.28	+0.6
3,474,782	+		MIT1002_03120	0.28	-0.9
3,474,812	+		MIT1002_03120	0.33	-2.0
3,474,831	+		MIT1002_03120	0.36	-0.2
3,474,839	-		MIT1002_03120	0.38	-1.0
3,474,840	+		MIT1002_03120	0.38	+0.2
3,474,840	+		MIT1002_03120	0.38	+0.9
3,474,844	-		MIT1002_03120	0.39	-1.6
3,474,847	+		MIT1002_03120	0.39	-2.2
3,474,935	-		MIT1002_03120	0.54	+0.9
3,474,935	-		MIT1002_03120	0.54	+0.9
3,474,950	-		MIT1002_03120	0.56	-0.1
3,474,963	+		MIT1002_03120	0.58	-1.1
3,474,996	-		MIT1002_03120	0.64	-0.6
3,475,022	+		MIT1002_03120	0.68	-1.3
3,475,037	+		MIT1002_03120	0.71	-0.5
3,475,055	-		MIT1002_03120	0.74	+0.4
3,475,069	+		MIT1002_03120	0.76	+0.0
3,475,069	+		MIT1002_03120	0.76	-1.3
3,475,069	+		MIT1002_03120	0.76	-0.4
3,475,069	+		MIT1002_03120	0.76	-2.3
3,475,069	+		MIT1002_03120	0.76	-0.5
3,475,069	+		MIT1002_03120	0.76	-0.7
3,475,077	-		MIT1002_03120	0.78	-0.4
3,475,077	-		MIT1002_03120	0.78	+0.3
3,475,077	-		MIT1002_03120	0.78	-0.8
3,475,077	-		MIT1002_03120	0.78	+1.1
3,475,151	+				-0.4
3,475,159	-				+0.3
3,475,159	-				-0.8
3,475,159	-				+1.0
3,475,173	+				-0.1
3,475,173	+				+0.4
3,475,181	-				+1.2
3,475,204	-				-0.4
3,475,293	-		MIT1002_03121	0.16	+1.0
3,475,344	+		MIT1002_03121	0.32	+0.4
3,475,365	+		MIT1002_03121	0.38	+0.8
3,475,448	-		MIT1002_03121	0.63	+0.4
3,475,522	+		MIT1002_03121	0.86	+0.7
3,475,576	-				+0.8
3,475,617	-				+0.2
3,475,777	+		MIT1002_03122	0.16	+0.8
3,475,784	-		MIT1002_03122	0.17	+1.0
3,475,822	+		MIT1002_03122	0.20	+1.7
3,475,827	+		MIT1002_03122	0.20	-0.3
3,475,837	+		MIT1002_03122	0.21	-0.2
3,475,846	-		MIT1002_03122	0.22	+0.8
3,475,861	-		MIT1002_03122	0.23	+1.0
3,475,977	-		MIT1002_03122	0.33	+0.1
3,476,069	+		MIT1002_03122	0.41	+0.1
3,476,069	+		MIT1002_03122	0.41	+0.1
3,476,090	+		MIT1002_03122	0.42	+0.6
3,476,090	+		MIT1002_03122	0.42	-0.2
3,476,098	-		MIT1002_03122	0.43	-1.2
3,476,147	-		MIT1002_03122	0.47	+0.1
3,476,233	-		MIT1002_03122	0.54	+1.6
3,476,339	-		MIT1002_03122	0.63	-2.1
3,476,339	-		MIT1002_03122	0.63	+0.2
3,476,405	-		MIT1002_03122	0.69	-0.2
3,476,431	-		MIT1002_03122	0.71	-0.0
3,476,464	+		MIT1002_03122	0.74	+0.4
3,476,497	-		MIT1002_03122	0.77	-0.8
3,476,519	-		MIT1002_03122	0.78	+0.3
3,476,614	+		MIT1002_03122	0.86	+0.3
3,476,614	+		MIT1002_03122	0.86	-1.1
3,476,614	+		MIT1002_03122	0.86	-1.4
3,476,614	+		MIT1002_03122	0.86	-0.4
3,476,614	+		MIT1002_03122	0.86	-0.2
3,476,622	-		MIT1002_03122	0.87	-0.1
3,476,622	-		MIT1002_03122	0.87	+0.9
3,476,622	-		MIT1002_03122	0.87	+0.2
3,476,622	-		MIT1002_03122	0.87	+0.5
3,476,680	+				+0.9
3,476,682	-				-0.0
3,476,741	-				+0.4
3,476,852	-		MIT1002_03123	0.13	-0.1
3,476,909	-		MIT1002_03123	0.22	+0.3
3,476,923	+		MIT1002_03123	0.24	+0.5
3,476,923	+		MIT1002_03123	0.24	-0.0
3,476,926	-		MIT1002_03123	0.25	-1.2
3,476,978	+		MIT1002_03123	0.33	-1.3
3,477,073	+		MIT1002_03123	0.48	+0.5
3,477,081	-		MIT1002_03123	0.50	+2.4
3,477,130	-		MIT1002_03123	0.58	+0.1
3,477,266	-		MIT1002_03123	0.80	-1.1
3,477,349	+				-1.1
3,477,437	+		MIT1002_03124	0.11	-0.4
3,477,471	+		MIT1002_03124	0.21	+0.9
3,477,488	+		MIT1002_03124	0.26	+0.7
3,477,517	+		MIT1002_03124	0.35	+2.2
3,477,517	+		MIT1002_03124	0.35	+1.2
3,477,525	-		MIT1002_03124	0.38	+0.4
3,477,533	+		MIT1002_03124	0.40	-5.7
3,477,533	+		MIT1002_03124	0.40	-0.2
3,477,560	-		MIT1002_03124	0.48	+1.2
3,477,734	-				-2.0
3,477,736	-				-0.3
3,477,757	+				-1.1
3,477,765	-				-1.4