Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02938

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
3,267,420	+		MIT1002_02937	0.35	-0.1
3,267,471	+		MIT1002_02937	0.39	+0.4
3,267,518	+		MIT1002_02937	0.42	+0.2
3,267,519	-		MIT1002_02937	0.42	+0.2
3,267,561	+		MIT1002_02937	0.45	-0.7
3,267,618	+		MIT1002_02937	0.49	+0.8
3,267,631	-		MIT1002_02937	0.50	+1.1
3,267,631	-		MIT1002_02937	0.50	-0.2
3,267,631	-		MIT1002_02937	0.50	+1.2
3,267,669	+		MIT1002_02937	0.53	-1.6
3,267,706	+		MIT1002_02937	0.55	-1.3
3,267,706	+		MIT1002_02937	0.55	-0.3
3,267,706	+		MIT1002_02937	0.55	-0.4
3,267,706	+		MIT1002_02937	0.55	+1.0
3,267,714	-		MIT1002_02937	0.56	+0.4
3,267,714	-		MIT1002_02937	0.56	+1.1
3,267,714	-		MIT1002_02937	0.56	+0.3
3,267,817	-		MIT1002_02937	0.63	-0.1
3,267,864	+		MIT1002_02937	0.66	+1.7
3,267,919	+		MIT1002_02937	0.70	+1.8
3,267,927	-		MIT1002_02937	0.71	-0.4
3,268,048	+		MIT1002_02937	0.79	+1.6
3,268,048	+		MIT1002_02937	0.79	+2.9
3,268,048	+		MIT1002_02937	0.79	-1.1
3,268,056	-		MIT1002_02937	0.80	+0.5
3,268,056	-		MIT1002_02937	0.80	-1.6
3,268,078	+		MIT1002_02937	0.81	-0.4
3,268,086	-		MIT1002_02937	0.82	-1.5
3,268,139	+		MIT1002_02937	0.86	-1.0
3,268,139	+		MIT1002_02937	0.86	+0.4
3,268,262	+				-0.0
3,268,262	+				-0.6
3,268,292	-				-1.0
3,268,297	+				+1.3
3,268,318	-				-0.2
3,268,330	+				+0.9
3,268,360	-				-1.8
3,268,366	-				+0.6
3,268,448	+				-0.2
3,268,502	+		MIT1002_02938	0.11	-0.0
3,268,510	-		MIT1002_02938	0.11	-1.8
3,268,533	+		MIT1002_02938	0.14	+1.7
3,268,548	-		MIT1002_02938	0.16	+0.2
3,268,610	+		MIT1002_02938	0.23	-0.7
3,268,611	-		MIT1002_02938	0.23	+0.4
3,268,611	-		MIT1002_02938	0.23	-1.1
3,268,618	-		MIT1002_02938	0.24	-0.4
3,268,736	-		MIT1002_02938	0.37	-0.6
3,268,746	-		MIT1002_02938	0.38	-2.0
3,268,748	-		MIT1002_02938	0.38	+0.1
3,268,748	-		MIT1002_02938	0.38	-0.6
3,268,832	+		MIT1002_02938	0.48	+1.6
3,268,840	-		MIT1002_02938	0.49	+0.3
3,268,905	-		MIT1002_02938	0.56	+1.5
3,268,907	-		MIT1002_02938	0.56	-0.4
3,268,928	+		MIT1002_02938	0.59	-1.0
3,268,938	-		MIT1002_02938	0.60	-0.8
3,268,956	+		MIT1002_02938	0.62	-4.0
3,268,964	-		MIT1002_02938	0.63	-0.5
3,269,016	+		MIT1002_02938	0.68	-0.2
3,269,103	+		MIT1002_02938	0.78	+0.4
3,269,111	-		MIT1002_02938	0.79	-1.0
3,269,111	-		MIT1002_02938	0.79	+0.0
3,269,116	+		MIT1002_02938	0.80	+1.0
3,269,146	+		MIT1002_02938	0.83	+0.0
3,269,147	-		MIT1002_02938	0.83	+1.5
3,269,169	-		MIT1002_02938	0.86	+0.2
3,269,205	-		MIT1002_02938	0.90	+0.9
3,269,208	+				+0.2
3,269,235	+				-0.6
3,269,302	-				-0.2
3,269,387	-				+0.2
3,269,396	-				-1.2
3,269,522	-				+0.1
3,269,584	+				-0.3
3,269,664	-		MIT1002_02939	0.14	-0.0
3,269,717	+		MIT1002_02939	0.22	-0.6
3,269,718	-		MIT1002_02939	0.22	-0.2
3,269,727	-		MIT1002_02939	0.23	+0.2
3,269,736	-		MIT1002_02939	0.24	+0.4
3,269,801	+		MIT1002_02939	0.34	+0.9
3,269,869	-		MIT1002_02939	0.43	-2.0
3,269,896	+		MIT1002_02939	0.47	-0.1
3,269,896	+		MIT1002_02939	0.47	-0.0
3,269,896	+		MIT1002_02939	0.47	-1.3
3,269,896	+		MIT1002_02939	0.47	-0.1
3,269,896	+		MIT1002_02939	0.47	-0.2
3,269,896	+		MIT1002_02939	0.47	+1.2
3,269,904	-		MIT1002_02939	0.48	-0.3
3,269,904	-		MIT1002_02939	0.48	-2.1
3,269,904	-		MIT1002_02939	0.48	+0.3
3,270,264	-				-1.1
3,270,278	-				+0.3