Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02835

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
3,143,126	+				+0.1
3,143,134	-				+0.9
3,143,168	+				-1.6
3,143,267	+				-0.6
3,143,309	+		MIT1002_02834	0.12	-0.1
3,143,317	-		MIT1002_02834	0.13	+0.5
3,143,324	+		MIT1002_02834	0.14	+1.1
3,143,366	-		MIT1002_02834	0.19	-0.2
3,143,396	+		MIT1002_02834	0.22	-0.2
3,143,404	-		MIT1002_02834	0.23	+0.0
3,143,404	-		MIT1002_02834	0.23	+1.2
3,143,404	-		MIT1002_02834	0.23	+0.0
3,143,555	-		MIT1002_02834	0.40	+0.0
3,143,577	-		MIT1002_02834	0.43	+0.3
3,143,589	+		MIT1002_02834	0.44	-0.3
3,143,605	+		MIT1002_02834	0.46	-0.5
3,143,656	-		MIT1002_02834	0.52	+2.1
3,143,658	+		MIT1002_02834	0.52	+0.3
3,143,660	+		MIT1002_02834	0.52	+0.1
3,143,665	+		MIT1002_02834	0.53	-1.8
3,143,665	+		MIT1002_02834	0.53	+3.3
3,143,666	-		MIT1002_02834	0.53	+0.4
3,143,688	-		MIT1002_02834	0.55	-0.7
3,143,726	-		MIT1002_02834	0.60	-0.2
3,143,728	+		MIT1002_02834	0.60	-0.5
3,143,728	+		MIT1002_02834	0.60	-0.0
3,143,736	-		MIT1002_02834	0.61	-0.5
3,143,736	-		MIT1002_02834	0.61	+0.1
3,143,909	+		MIT1002_02834	0.80	-0.2
3,143,930	+		MIT1002_02834	0.83	+0.2
3,143,930	-		MIT1002_02834	0.83	+1.0
3,143,940	-		MIT1002_02834	0.84	+0.9
3,143,940	-		MIT1002_02834	0.84	+0.7
3,144,078	+				+0.1
3,145,181	-				-1.5
3,145,195	+				-0.2
3,145,295	-		MIT1002_02836	0.14	-0.1
3,145,295	-		MIT1002_02836	0.14	+1.0
3,145,375	-		MIT1002_02836	0.21	-1.8
3,145,375	-		MIT1002_02836	0.21	+1.0
3,145,375	-		MIT1002_02836	0.21	-2.1
3,145,375	-		MIT1002_02836	0.21	-1.8
3,145,416	+		MIT1002_02836	0.25	+0.4
3,145,453	-		MIT1002_02836	0.28	+0.4
3,145,619	-		MIT1002_02836	0.43	-1.1
3,145,619	-		MIT1002_02836	0.43	+0.6
3,145,683	-		MIT1002_02836	0.48	-0.5
3,145,717	+		MIT1002_02836	0.51	+0.1
3,145,740	-		MIT1002_02836	0.53	+1.8
3,145,754	-		MIT1002_02836	0.54	+0.9
3,145,826	-		MIT1002_02836	0.61	+0.1
3,145,968	+		MIT1002_02836	0.73	-0.1
3,145,974	-		MIT1002_02836	0.74	+1.1
3,146,125	-		MIT1002_02836	0.87	+0.3