Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02728

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
3,029,481	+				+0.4
3,029,482	-				-1.7
3,029,522	+				+0.5
3,029,530	+				-0.2
3,029,533	+				+0.2
3,029,639	+				-1.5
3,029,763	+				+0.6
3,029,790	-				-2.8
3,029,803	+				-0.0
3,029,803	+				+0.2
3,029,803	+				-1.4
3,029,847	+				+0.7
3,029,847	+				-1.8
3,029,847	+				+1.2
3,029,883	+				-1.9
3,029,987	-		MIT1002_02728	0.28	+0.1
3,030,027	-		MIT1002_02728	0.36	+0.2
3,030,032	-		MIT1002_02728	0.37	-1.1
3,030,034	-		MIT1002_02728	0.37	+1.1
3,030,041	+		MIT1002_02728	0.38	+0.6
3,030,041	+		MIT1002_02728	0.38	-0.1
3,030,041	+		MIT1002_02728	0.38	-1.1
3,030,209	+		MIT1002_02728	0.69	+0.2
3,030,211	+		MIT1002_02728	0.69	-1.1
3,030,239	-		MIT1002_02728	0.75	-0.1
3,030,240	-		MIT1002_02728	0.75	-0.9
3,030,246	+		MIT1002_02728	0.76	-0.8
3,030,312	+		MIT1002_02728	0.88	-0.4
3,030,368	-				+1.8
3,030,368	-				-1.7
3,030,378	-				+1.7
3,030,463	+		MIT1002_02729	0.12	+1.0
3,030,463	+		MIT1002_02729	0.12	+1.0
3,030,484	+		MIT1002_02729	0.17	+0.1
3,030,492	-		MIT1002_02729	0.19	-0.3
3,030,605	-		MIT1002_02729	0.48	-0.2
3,030,644	-		MIT1002_02729	0.58	-0.6
3,030,648	+		MIT1002_02729	0.59	+0.8
3,030,723	+		MIT1002_02729	0.78	+0.4
3,030,724	+		MIT1002_02729	0.78	-0.0
3,030,824	-				-1.1
3,030,869	+				+1.1
3,030,924	+				+0.1
3,030,932	-				-0.8
3,030,949	+		MIT1002_02730	0.11	-0.2
3,030,956	-		MIT1002_02730	0.12	-0.0
3,031,147	+		MIT1002_02730	0.47	-0.3
3,031,208	+		MIT1002_02730	0.58	+0.7
3,031,256	+		MIT1002_02730	0.66	+0.4
3,031,256	-		MIT1002_02730	0.66	-1.4
3,031,365	-		MIT1002_02730	0.86	+0.3