Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02683

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
2,984,025	-		MIT1002_02681	0.63	-4.6
2,984,025	-		MIT1002_02681	0.63	-4.0
2,984,064	-		MIT1002_02681	0.68	-4.4
2,984,204	+		MIT1002_02681	0.87	-1.6
2,984,226	-				-0.2
2,984,239	+				-2.0
2,984,262	+				-4.2
2,984,316	+				-0.9
2,984,323	+				-0.9
2,984,369	+		MIT1002_02682	0.12	+0.8
2,984,369	+		MIT1002_02682	0.12	+1.2
2,984,428	-		MIT1002_02682	0.22	-0.8
2,984,731	+		MIT1002_02682	0.72	-1.4
2,984,742	+		MIT1002_02682	0.73	-1.1
2,984,742	+		MIT1002_02682	0.73	-3.5
2,984,744	+		MIT1002_02682	0.74	-1.0
2,984,784	+		MIT1002_02682	0.80	-0.9
2,984,789	+		MIT1002_02682	0.81	-1.0
2,984,801	+		MIT1002_02682	0.83	-0.5
2,984,817	-		MIT1002_02682	0.86	-0.8
2,984,853	+				-0.5
2,984,853	+				-0.7
2,984,853	+				-0.5
2,984,861	-				-0.0
2,985,003	+				-0.5
2,985,003	+				-0.9
2,985,011	-				+0.3
2,985,011	-				+0.0
2,985,011	-				+0.7
2,985,015	+				+0.3
2,985,254	+		MIT1002_02683	0.40	-2.3
2,985,261	+		MIT1002_02683	0.41	-1.6
2,985,261	+		MIT1002_02683	0.41	-2.3
2,985,261	+		MIT1002_02683	0.41	-3.0
2,985,264	-		MIT1002_02683	0.42	-1.1
2,985,269	-		MIT1002_02683	0.43	-4.8
2,985,320	+		MIT1002_02683	0.52	-2.4
2,985,320	-		MIT1002_02683	0.52	-2.4
2,985,323	-		MIT1002_02683	0.52	-2.3
2,985,354	-		MIT1002_02683	0.57	-1.9
2,985,359	-		MIT1002_02683	0.58	-2.9
2,985,392	-		MIT1002_02683	0.64	-2.1
2,985,463	+		MIT1002_02683	0.76	-3.2
2,985,564	+				-0.7
2,985,594	+				-1.5
2,985,602	-				-0.4
2,985,635	+				+0.6
2,985,635	+				-0.8
2,985,635	+				-2.1
2,985,852	+				+1.8
2,985,916	+		MIT1002_02684	0.13	-0.1
2,985,916	+		MIT1002_02684	0.13	-0.4
2,985,921	+		MIT1002_02684	0.14	-0.3
2,985,921	+		MIT1002_02684	0.14	+1.4
2,985,924	-		MIT1002_02684	0.15	+0.2
2,985,924	-		MIT1002_02684	0.15	+0.0
2,985,924	-		MIT1002_02684	0.15	-0.2
2,986,077	+		MIT1002_02684	0.49	+1.1
2,986,085	-		MIT1002_02684	0.50	+0.8
2,986,096	+		MIT1002_02684	0.53	+0.6
2,986,102	+		MIT1002_02684	0.54	-0.8
2,986,104	-		MIT1002_02684	0.55	+0.3
2,986,132	+		MIT1002_02684	0.61	+0.7
2,986,132	+		MIT1002_02684	0.61	-0.4
2,986,140	-		MIT1002_02684	0.62	-0.3
2,986,140	-		MIT1002_02684	0.62	+0.2
2,986,140	-		MIT1002_02684	0.62	+0.4
2,986,140	-		MIT1002_02684	0.62	+0.7
2,986,168	-		MIT1002_02684	0.69	+1.2
2,986,169	+		MIT1002_02684	0.69	+2.0
2,986,192	-		MIT1002_02684	0.74	+0.1
2,986,253	+		MIT1002_02684	0.87	-0.1
2,986,348	-				-1.9
2,986,377	+				+0.1
2,986,380	+		MIT1002_02685	0.10	-1.0
2,986,425	+		MIT1002_02685	0.16	+1.0
2,986,449	+		MIT1002_02685	0.20	-2.3
2,986,482	-		MIT1002_02685	0.24	+0.2
2,986,525	+		MIT1002_02685	0.30	+0.1
2,986,525	+		MIT1002_02685	0.30	+0.3
2,986,528	-		MIT1002_02685	0.31	-1.1
2,986,533	-		MIT1002_02685	0.31	-0.4