Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02399

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
2,676,384	+		MIT1002_02398	0.56	+0.2
2,676,384	+		MIT1002_02398	0.56	-1.5
2,676,394	+		MIT1002_02398	0.56	-0.6
2,676,458	+		MIT1002_02398	0.59	-1.7
2,676,466	-		MIT1002_02398	0.59	+0.2
2,676,466	-		MIT1002_02398	0.59	-1.3
2,676,480	+		MIT1002_02398	0.60	-0.4
2,676,537	+		MIT1002_02398	0.63	-1.1
2,676,545	-		MIT1002_02398	0.63	-0.9
2,676,605	-		MIT1002_02398	0.66	+0.5
2,676,610	-		MIT1002_02398	0.66	-2.1
2,676,661	+		MIT1002_02398	0.69	-0.2
2,676,689	-		MIT1002_02398	0.70	-0.6
2,676,692	+		MIT1002_02398	0.70	-0.5
2,676,735	-		MIT1002_02398	0.72	-0.9
2,676,856	-		MIT1002_02398	0.78	-0.3
2,677,033	+		MIT1002_02398	0.87	-1.6
2,677,040	-		MIT1002_02398	0.87	+2.2
2,677,067	+		MIT1002_02398	0.88	-1.4
2,677,072	+		MIT1002_02398	0.89	-1.7
2,677,072	+		MIT1002_02398	0.89	-4.4
2,677,072	+		MIT1002_02398	0.89	-1.0
2,677,075	-		MIT1002_02398	0.89	-1.5
2,677,080	-		MIT1002_02398	0.89	+0.1
2,677,080	-		MIT1002_02398	0.89	-0.0
2,677,096	+		MIT1002_02398	0.90	-1.5
2,677,130	+				-0.0
2,677,130	+				-2.6
2,677,261	-				-0.8
2,677,328	-				-2.8
2,677,352	+				+0.3
2,679,606	-				-1.2
2,679,707	-				+1.7
2,679,846	+				-3.7
2,679,871	+				-3.5
2,679,877	-				-4.2
2,679,882	+				-4.0
2,679,884	+				-3.8
2,679,896	+				-2.3
2,679,906	+				-5.4
2,680,058	+		MIT1002_02400	0.17	-3.0
2,680,081	+		MIT1002_02400	0.18	-3.9
2,680,345	-		MIT1002_02400	0.30	-1.8
2,680,438	+		MIT1002_02400	0.34	-4.1
2,680,473	+		MIT1002_02400	0.36	-4.4
2,680,495	-		MIT1002_02400	0.37	-1.7
2,680,514	-		MIT1002_02400	0.38	-3.0
2,680,514	-		MIT1002_02400	0.38	-1.9
2,680,514	-		MIT1002_02400	0.38	-2.3