Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02139

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
2,399,150	+		MIT1002_02138	0.17	-0.0
2,399,158	-		MIT1002_02138	0.18	-1.1
2,399,158	-		MIT1002_02138	0.18	-0.3
2,399,330	-		MIT1002_02138	0.36	+0.7
2,399,410	+		MIT1002_02138	0.45	-0.5
2,399,430	+		MIT1002_02138	0.47	+1.3
2,399,433	-		MIT1002_02138	0.48	+0.5
2,399,433	-		MIT1002_02138	0.48	+0.3
2,399,433	-		MIT1002_02138	0.48	+1.7
2,399,443	-		MIT1002_02138	0.49	-0.2
2,399,579	+		MIT1002_02138	0.63	-4.1
2,399,580	+		MIT1002_02138	0.64	+1.5
2,399,587	-		MIT1002_02138	0.64	+0.2
2,399,891	+				+1.0
2,399,928	+				-0.5
2,399,936	-				+0.2
2,399,936	-				-0.2
2,400,151	-				-1.1
2,400,244	+		MIT1002_02139	0.19	+1.3
2,400,375	+		MIT1002_02139	0.32	-1.1
2,400,404	+		MIT1002_02139	0.36	+0.3
2,400,409	+		MIT1002_02139	0.36	-0.4
2,400,422	-		MIT1002_02139	0.37	-0.4
2,400,470	+		MIT1002_02139	0.42	+0.7
2,400,485	+		MIT1002_02139	0.44	+0.2
2,400,485	+		MIT1002_02139	0.44	-0.4
2,400,485	+		MIT1002_02139	0.44	+0.4
2,400,493	-		MIT1002_02139	0.45	+0.2
2,400,493	-		MIT1002_02139	0.45	+0.8
2,400,533	+		MIT1002_02139	0.49	-0.8
2,400,585	-		MIT1002_02139	0.55	-0.3
2,400,592	+		MIT1002_02139	0.55	-0.7
2,400,592	+		MIT1002_02139	0.55	-0.3
2,400,600	-		MIT1002_02139	0.56	-0.1
2,400,632	+		MIT1002_02139	0.59	-0.6
2,400,636	-		MIT1002_02139	0.60	+1.7
2,400,766	+		MIT1002_02139	0.73	+1.2
2,400,768	-		MIT1002_02139	0.74	+0.6
2,400,812	-		MIT1002_02139	0.78	-0.9
2,400,812	-		MIT1002_02139	0.78	+1.0
2,400,903	+		MIT1002_02139	0.88	+0.3
2,400,936	-				-0.0
2,400,976	+				+0.5
2,400,984	-				-0.5
2,401,057	+				-0.3
2,401,057	+				+1.5
2,401,171	+		MIT1002_02140	0.15	+1.1
2,401,187	+		MIT1002_02140	0.16	-0.6
2,401,187	+		MIT1002_02140	0.16	-1.3
2,401,241	-		MIT1002_02140	0.22	-0.4
2,401,354	+		MIT1002_02140	0.33	+0.0
2,401,354	+		MIT1002_02140	0.33	-0.3
2,401,354	+		MIT1002_02140	0.33	+0.8
2,401,354	+		MIT1002_02140	0.33	+1.0
2,401,362	-		MIT1002_02140	0.34	-0.6
2,401,362	-		MIT1002_02140	0.34	-1.2
2,401,378	+		MIT1002_02140	0.35	+0.6
2,401,383	+		MIT1002_02140	0.36	-0.1
2,401,384	-		MIT1002_02140	0.36	-0.3
2,401,386	-		MIT1002_02140	0.36	-1.7
2,401,396	-		MIT1002_02140	0.37	-0.3
2,401,404	+		MIT1002_02140	0.38	+0.2
2,401,412	-		MIT1002_02140	0.38	+0.4
2,401,481	+		MIT1002_02140	0.45	-0.4
2,401,488	+		MIT1002_02140	0.46	+0.0
2,401,489	+		MIT1002_02140	0.46	-0.4
2,401,496	-		MIT1002_02140	0.47	-1.1
2,401,755	+		MIT1002_02140	0.72	-1.9
2,401,763	-		MIT1002_02140	0.73	-0.3
2,401,841	+		MIT1002_02140	0.80	-0.8
2,401,859	-		MIT1002_02140	0.82	-0.2
2,401,865	+		MIT1002_02140	0.83	-0.9
2,401,944	+				+1.0
2,401,962	+				-0.6
2,401,962	+				-0.4
2,401,964	+				-0.4
2,401,980	-				-0.4
2,401,996	-				+0.6