Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02002

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
2,236,758	+		MIT1002_02000	0.75	-0.4
2,236,771	+		MIT1002_02000	0.77	-0.5
2,236,771	+		MIT1002_02000	0.77	+1.6
2,236,815	-		MIT1002_02000	0.83	+0.9
2,236,836	+		MIT1002_02000	0.87	+0.2
2,236,867	+				+2.3
2,236,890	-				+0.0
2,236,913	+				-0.4
2,236,920	+				-0.1
2,236,921	-				-1.0
2,236,928	-				-1.1
2,236,928	-				-1.2
2,236,928	-				+1.2
2,236,928	-				+3.4
2,236,958	-				-1.2
2,237,008	+		MIT1002_02001	0.12	+0.8
2,237,049	+		MIT1002_02001	0.18	-0.1
2,237,064	-		MIT1002_02001	0.20	-0.0
2,237,078	-		MIT1002_02001	0.22	+0.2
2,237,111	-		MIT1002_02001	0.27	+0.0
2,237,235	-		MIT1002_02001	0.44	-0.0
2,237,250	+		MIT1002_02001	0.46	-0.4
2,237,258	-		MIT1002_02001	0.47	-0.6
2,237,264	-		MIT1002_02001	0.48	-1.3
2,237,348	-		MIT1002_02001	0.60	+1.1
2,237,350	+		MIT1002_02001	0.60	-0.2
2,237,415	+		MIT1002_02001	0.69	-1.5
2,237,483	+		MIT1002_02001	0.79	-1.1
2,237,491	-		MIT1002_02001	0.80	-0.5
2,237,540	+		MIT1002_02001	0.87	+0.1
2,237,548	-		MIT1002_02001	0.88	+0.8
2,237,592	-				+0.6
2,237,604	+				+1.3
2,237,808	-				+1.4
2,237,896	-		MIT1002_02002	0.16	+2.5
2,237,919	+		MIT1002_02002	0.19	-0.7
2,237,919	+		MIT1002_02002	0.19	-0.5
2,237,925	+		MIT1002_02002	0.19	-0.1
2,237,927	-		MIT1002_02002	0.20	+0.1
2,237,933	-		MIT1002_02002	0.20	+0.4
2,237,968	-		MIT1002_02002	0.24	+0.8
2,238,037	-		MIT1002_02002	0.32	-1.3
2,238,184	+		MIT1002_02002	0.49	-1.1
2,238,315	+		MIT1002_02002	0.64	-0.3
2,238,369	-		MIT1002_02002	0.70	-0.5
2,238,373	+		MIT1002_02002	0.70	-0.3
2,238,391	-		MIT1002_02002	0.72	-0.8
2,238,589	-				+0.3
2,238,760	+		MIT1002_02003	0.11	+0.1
2,238,760	+		MIT1002_02003	0.11	-0.5
2,238,768	-		MIT1002_02003	0.12	-1.2
2,238,771	+		MIT1002_02003	0.13	-0.8
2,238,802	-		MIT1002_02003	0.17	+2.6
2,238,816	-		MIT1002_02003	0.19	+0.9
2,238,816	-		MIT1002_02003	0.19	+0.3
2,238,979	-		MIT1002_02003	0.40	+1.5
2,239,027	-		MIT1002_02003	0.46	+0.3
2,239,130	+		MIT1002_02003	0.60	+0.0
2,239,175	+		MIT1002_02003	0.66	+0.6
2,239,180	+		MIT1002_02003	0.67	-0.9
2,239,180	+		MIT1002_02003	0.67	-0.4
2,239,183	-		MIT1002_02003	0.67	+0.2
2,239,273	-		MIT1002_02003	0.79	+0.2
2,239,314	-		MIT1002_02003	0.84	-0.1
2,239,325	+		MIT1002_02003	0.86	+0.3
2,239,325	+		MIT1002_02003	0.86	-2.1
2,239,325	+		MIT1002_02003	0.86	+1.1
2,239,483	-				-2.7
2,239,493	-				-0.1
2,239,566	-				+1.4
2,239,582	+				-1.3
2,239,582	+				+0.4
2,239,582	+				+0.7