Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01595

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
1,756,573	-		MIT1002_01594	0.49	-1.2
1,756,581	+		MIT1002_01594	0.49	-0.3
1,756,589	-		MIT1002_01594	0.50	-0.9
1,756,619	+		MIT1002_01594	0.52	-0.0
1,756,619	+		MIT1002_01594	0.52	-0.1
1,756,627	+		MIT1002_01594	0.52	-1.5
1,756,918	-		MIT1002_01594	0.71	-1.4
1,756,918	-		MIT1002_01594	0.71	-0.5
1,756,968	-		MIT1002_01594	0.74	-1.1
1,756,969	-		MIT1002_01594	0.74	-0.6
1,757,001	-		MIT1002_01594	0.76	+0.2
1,757,023	-		MIT1002_01594	0.77	-1.1
1,757,082	+		MIT1002_01594	0.81	-0.3
1,757,082	+		MIT1002_01594	0.81	-1.8
1,757,090	-		MIT1002_01594	0.81	-0.9
1,757,158	+		MIT1002_01594	0.86	-3.8
1,757,316	+				-0.5
1,757,316	+				+0.5
1,757,316	+				+0.3
1,757,415	+				-1.1
1,757,451	+				+0.5
1,757,457	-				-0.0
1,757,490	-				+0.9
1,757,542	+				-0.7
1,757,550	-				+0.6
1,757,639	+				-1.4
1,757,642	-				-1.1
1,757,642	-				-0.3
1,757,647	-				-0.6
1,757,676	+				+1.9
1,757,758	+		MIT1002_01595	0.16	-0.2
1,757,758	+		MIT1002_01595	0.16	+1.2
1,757,758	+		MIT1002_01595	0.16	+0.4
1,757,758	+		MIT1002_01595	0.16	-0.3
1,757,758	+		MIT1002_01595	0.16	+0.4
1,757,758	+		MIT1002_01595	0.16	-0.5
1,757,758	+		MIT1002_01595	0.16	-0.8
1,757,758	+		MIT1002_01595	0.16	-0.2
1,757,766	-		MIT1002_01595	0.17	+0.0
1,757,766	-		MIT1002_01595	0.17	-0.4
1,757,766	-		MIT1002_01595	0.17	+0.9
1,757,766	-		MIT1002_01595	0.17	-0.1
1,757,877	+		MIT1002_01595	0.26	-0.8
1,757,897	+		MIT1002_01595	0.27	-0.9
1,757,977	-		MIT1002_01595	0.34	+1.2
1,757,979	-		MIT1002_01595	0.34	+0.4
1,758,064	+		MIT1002_01595	0.40	-2.6
1,758,069	-		MIT1002_01595	0.41	-0.3
1,758,083	-		MIT1002_01595	0.42	-1.5
1,758,170	-		MIT1002_01595	0.49	+0.0
1,758,179	-		MIT1002_01595	0.50	+0.2
1,758,186	+		MIT1002_01595	0.50	+0.1
1,758,186	+		MIT1002_01595	0.50	-1.5
1,758,194	-		MIT1002_01595	0.51	-0.3
1,758,207	-		MIT1002_01595	0.52	+1.8
1,758,215	+		MIT1002_01595	0.52	-1.8
1,758,274	-		MIT1002_01595	0.57	+0.6
1,758,274	-		MIT1002_01595	0.57	-0.5
1,758,276	-		MIT1002_01595	0.57	-1.7
1,758,276	-		MIT1002_01595	0.57	-0.5
1,758,276	-		MIT1002_01595	0.57	+1.2
1,758,311	+		MIT1002_01595	0.60	-1.3
1,758,311	+		MIT1002_01595	0.60	+0.2
1,758,352	+		MIT1002_01595	0.63	-2.5
1,758,492	-		MIT1002_01595	0.74	+0.8
1,758,639	+		MIT1002_01595	0.86	+0.4
1,758,807	+				+0.2
1,759,088	-		MIT1002_01596	0.15	-0.3
1,759,128	-		MIT1002_01596	0.23	-1.5
1,759,239	-		MIT1002_01596	0.42	+0.4
1,759,255	+		MIT1002_01596	0.45	+0.0
1,759,261	-		MIT1002_01596	0.46	+0.0
1,759,263	-		MIT1002_01596	0.46	-0.1
1,759,283	+		MIT1002_01596	0.50	-1.0
1,759,297	+		MIT1002_01596	0.52	-0.8
1,759,376	+		MIT1002_01596	0.66	-0.3
1,759,392	+		MIT1002_01596	0.69	-0.5
1,759,398	+		MIT1002_01596	0.70	-0.3
1,759,398	+		MIT1002_01596	0.70	-0.1
1,759,406	-		MIT1002_01596	0.72	-0.6
1,759,412	+		MIT1002_01596	0.73	-0.9
1,759,420	-		MIT1002_01596	0.74	-2.4
1,759,476	+		MIT1002_01596	0.84	+0.4
1,759,485	-		MIT1002_01596	0.86	+1.4
1,759,492	-		MIT1002_01596	0.87	+0.2
1,759,492	-		MIT1002_01596	0.87	-0.4
1,759,494	+		MIT1002_01596	0.87	+0.0
1,759,501	+		MIT1002_01596	0.89	-1.4
1,759,502	-		MIT1002_01596	0.89	-1.7
1,759,517	+				-0.9
1,759,525	-				+1.0
1,759,527	+				-0.3
1,759,527	+				-1.8
1,759,577	-				+1.3
1,759,727	+				-1.9
1,759,735	-				-0.5
1,759,750	+				+0.2
1,759,762	+				-0.0
1,759,762	+				+0.2
1,759,762	+				-0.5
1,759,762	+				-0.6
1,759,763	+				+1.7
1,759,770	-				+0.7
1,759,771	-				-1.6
1,759,771	-				+0.5
1,759,771	-				+1.6
1,759,771	-				+0.8
1,759,771	-				+1.4
1,759,771	-				-0.3
1,759,771	-				-1.0
1,759,771	-				-0.3
1,759,771	-				-0.1
1,759,771	-				+0.8