Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01451

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
1,596,509	+		MIT1002_01450	0.41	+0.7
1,596,509	+		MIT1002_01450	0.41	+0.2
1,596,517	-		MIT1002_01450	0.41	+0.5
1,596,517	-		MIT1002_01450	0.41	+0.1
1,596,517	-		MIT1002_01450	0.41	+0.1
1,596,517	-		MIT1002_01450	0.41	-0.0
1,596,517	-		MIT1002_01450	0.41	-2.2
1,596,551	+		MIT1002_01450	0.44	-0.6
1,596,555	+		MIT1002_01450	0.44	+0.9
1,596,563	-		MIT1002_01450	0.45	-0.6
1,596,569	-		MIT1002_01450	0.45	+1.6
1,596,583	+		MIT1002_01450	0.46	-0.8
1,596,583	+		MIT1002_01450	0.46	-0.6
1,596,591	-		MIT1002_01450	0.47	-0.7
1,596,591	-		MIT1002_01450	0.47	-0.1
1,596,610	-		MIT1002_01450	0.48	-1.5
1,596,692	+		MIT1002_01450	0.54	+0.7
1,596,706	-		MIT1002_01450	0.55	+0.4
1,596,706	-		MIT1002_01450	0.55	+0.2
1,596,758	-		MIT1002_01450	0.58	-0.4
1,596,759	-		MIT1002_01450	0.58	+0.7
1,596,771	+		MIT1002_01450	0.59	-1.5
1,596,784	+		MIT1002_01450	0.60	+1.3
1,596,835	+		MIT1002_01450	0.64	-0.6
1,596,889	-		MIT1002_01450	0.67	+0.1
1,596,946	+		MIT1002_01450	0.71	-0.7
1,597,044	+		MIT1002_01450	0.78	+0.0
1,597,056	+		MIT1002_01450	0.79	+0.2
1,597,056	+		MIT1002_01450	0.79	-0.6
1,597,064	-		MIT1002_01450	0.80	+0.2
1,597,116	+		MIT1002_01450	0.83	+0.1
1,597,124	-		MIT1002_01450	0.84	+0.4
1,597,160	-		MIT1002_01450	0.86	+0.2
1,597,232	-				+1.9
1,597,270	+				-0.8
1,597,430	+				-0.2
1,597,430	+				-1.1
1,597,430	+				-0.9
1,597,438	-				+0.3
1,597,438	-				+0.4
1,597,438	-				+1.1
1,597,438	-				+0.3
1,597,438	-				+0.1
1,597,438	-				+0.3
1,597,438	-				+0.2
1,597,438	-				+0.2
1,597,438	-				+0.5
1,597,438	-				+0.1
1,597,442	+				+1.1
1,597,449	+				-1.2
1,597,449	+				-0.8
1,597,472	-				-0.8
1,597,477	-				-0.6
1,597,477	-				-0.1
1,597,498	+				+0.0
1,597,506	-				+0.5
1,597,602	-		MIT1002_01451	0.11	+0.4
1,597,653	+		MIT1002_01451	0.15	-2.6
1,597,653	+		MIT1002_01451	0.15	-0.7
1,597,671	+		MIT1002_01451	0.16	-0.3
1,597,674	-		MIT1002_01451	0.16	+0.5
1,597,676	+		MIT1002_01451	0.17	+0.7
1,597,679	-		MIT1002_01451	0.17	-1.2
1,597,679	-		MIT1002_01451	0.17	+0.4
1,597,679	-		MIT1002_01451	0.17	-0.6
1,597,679	-		MIT1002_01451	0.17	+0.8
1,597,696	+		MIT1002_01451	0.18	-0.2
1,597,696	+		MIT1002_01451	0.18	+0.4
1,597,704	-		MIT1002_01451	0.19	+0.7
1,597,704	-		MIT1002_01451	0.19	-1.0
1,597,704	-		MIT1002_01451	0.19	-0.8
1,597,704	-		MIT1002_01451	0.19	+0.0
1,597,704	-		MIT1002_01451	0.19	-0.1
1,597,704	-		MIT1002_01451	0.19	-2.4
1,597,777	-		MIT1002_01451	0.24	-0.4
1,597,811	-		MIT1002_01451	0.27	+0.2
1,597,876	-		MIT1002_01451	0.32	+1.1
1,597,876	-		MIT1002_01451	0.32	+1.0
1,597,878	-		MIT1002_01451	0.32	+0.4
1,597,960	+		MIT1002_01451	0.38	-0.3
1,597,965	-		MIT1002_01451	0.39	-0.0
1,598,071	+		MIT1002_01451	0.47	-0.1
1,598,071	+		MIT1002_01451	0.47	-2.7
1,598,079	-		MIT1002_01451	0.48	-0.3
1,598,079	-		MIT1002_01451	0.48	+0.4
1,598,079	-		MIT1002_01451	0.48	+0.1
1,598,081	-		MIT1002_01451	0.48	+0.8
1,598,089	-		MIT1002_01451	0.48	-0.2
1,598,091	+		MIT1002_01451	0.49	+0.0
1,598,091	+		MIT1002_01451	0.49	+0.4
1,598,091	+		MIT1002_01451	0.49	-0.8
1,598,091	+		MIT1002_01451	0.49	+0.3
1,598,099	-		MIT1002_01451	0.49	-0.6
1,598,099	-		MIT1002_01451	0.49	+0.8
1,598,099	-		MIT1002_01451	0.49	-1.1
1,598,099	-		MIT1002_01451	0.49	-0.7
1,598,099	-		MIT1002_01451	0.49	-0.7
1,598,099	-		MIT1002_01451	0.49	+0.6
1,598,099	-		MIT1002_01451	0.49	-0.2
1,598,099	-		MIT1002_01451	0.49	-0.0
1,598,111	+		MIT1002_01451	0.50	-0.8
1,598,351	+		MIT1002_01451	0.69	+0.1
1,598,417	-		MIT1002_01451	0.74	+0.2
1,598,419	+		MIT1002_01451	0.74	-1.0
1,598,427	-		MIT1002_01451	0.74	+0.5
1,598,427	-		MIT1002_01451	0.74	+1.0
1,598,427	-		MIT1002_01451	0.74	+0.3
1,598,427	-		MIT1002_01451	0.74	+0.8
1,598,427	-		MIT1002_01451	0.74	-0.2
1,598,434	+		MIT1002_01451	0.75	-1.1
1,598,434	+		MIT1002_01451	0.75	-1.6
1,598,442	-		MIT1002_01451	0.76	-1.6
1,598,446	+		MIT1002_01451	0.76	+2.0
1,598,507	+		MIT1002_01451	0.81	+0.2
1,598,510	+		MIT1002_01451	0.81	-0.5
1,598,599	+		MIT1002_01451	0.88	-0.6
1,598,599	+		MIT1002_01451	0.88	-1.1
1,598,611	+		MIT1002_01451	0.89	-2.3
1,598,967	+				+0.5
1,599,077	-				-1.0
1,599,085	+				+0.5
1,599,096	+				-0.1
1,599,147	-				+1.2
1,599,267	-		MIT1002_01452	0.10	-0.0
1,599,315	-		MIT1002_01452	0.12	-0.7
1,599,494	-		MIT1002_01452	0.20	+0.0
1,599,508	+		MIT1002_01452	0.20	+0.6
1,599,508	+		MIT1002_01452	0.20	-0.2
1,599,546	-		MIT1002_01452	0.22	-0.5
1,599,554	-		MIT1002_01452	0.22	+0.5
1,599,600	+		MIT1002_01452	0.24	+1.6
1,599,633	+		MIT1002_01452	0.26	+0.9
1,599,641	-		MIT1002_01452	0.26	+0.5
1,599,664	+		MIT1002_01452	0.27	-0.3
1,599,702	-		MIT1002_01452	0.29	+0.8
1,599,742	-		MIT1002_01452	0.30	+0.2