Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01323

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
1,469,284	+		MIT1002_01322	0.67	-0.7
1,469,292	-		MIT1002_01322	0.67	+0.1
1,469,349	-		MIT1002_01322	0.70	+0.9
1,469,353	+		MIT1002_01322	0.70	+1.6
1,469,353	+		MIT1002_01322	0.70	+0.4
1,469,450	+		MIT1002_01322	0.75	+0.8
1,469,621	+		MIT1002_01322	0.83	+0.2
1,469,666	+		MIT1002_01322	0.85	-0.7
1,469,666	+		MIT1002_01322	0.85	+0.4
1,469,666	+		MIT1002_01322	0.85	-0.1
1,469,836	+				-0.4
1,469,854	+				-0.1
1,469,864	+				-2.3
1,469,887	+				+1.1
1,469,903	+				+0.2
1,469,912	-				+0.2
1,469,921	+				+0.5
1,469,932	-				+0.8
1,470,001	-				-0.1
1,470,003	+				+0.9
1,470,050	+				+0.4
1,470,058	-				-0.8
1,470,058	-				+0.4
1,470,208	+				+0.7
1,470,213	+				-0.5
1,470,216	-				+0.0
1,470,327	-		MIT1002_01323	0.20	-0.1
1,470,327	-		MIT1002_01323	0.20	+1.1
1,470,396	-		MIT1002_01323	0.45	+0.3
1,470,405	-		MIT1002_01323	0.48	+0.1
1,470,433	+		MIT1002_01323	0.58	-1.5
1,470,433	+		MIT1002_01323	0.58	+1.2
1,470,433	+		MIT1002_01323	0.58	-0.8
1,470,433	+		MIT1002_01323	0.58	+0.8
1,470,433	+		MIT1002_01323	0.58	+0.3
1,470,434	-		MIT1002_01323	0.58	+0.6
1,470,441	-		MIT1002_01323	0.61	+0.5
1,470,441	-		MIT1002_01323	0.61	+1.1
1,470,441	-		MIT1002_01323	0.61	-0.6
1,470,441	-		MIT1002_01323	0.61	+0.6
1,470,454	-		MIT1002_01323	0.66	+2.2
1,470,544	-				+0.7
1,470,570	+				-0.3
1,470,634	-				-0.7
1,470,634	-				+0.6
1,470,640	+				+0.7
1,470,650	+				-0.2
1,470,670	-				-2.0
1,470,673	+				-2.0
1,470,681	-				-0.8
1,470,794	+		MIT1002_01324	0.13	+0.1
1,470,812	-		MIT1002_01324	0.14	+0.1
1,470,908	-		MIT1002_01324	0.21	+0.8
1,470,982	-		MIT1002_01324	0.27	-0.3
1,471,025	+		MIT1002_01324	0.30	+0.2
1,471,122	+		MIT1002_01324	0.37	+0.4
1,471,122	+		MIT1002_01324	0.37	+0.3
1,471,130	-		MIT1002_01324	0.37	+1.2
1,471,130	-		MIT1002_01324	0.37	-1.5
1,471,137	-		MIT1002_01324	0.38	+0.7
1,471,169	+		MIT1002_01324	0.40	+0.4
1,471,345	+		MIT1002_01324	0.53	-0.5
1,471,371	+		MIT1002_01324	0.54	+0.6
1,471,399	-		MIT1002_01324	0.56	-0.4
1,471,520	+		MIT1002_01324	0.65	+0.7