Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01297

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 4
1,437,274	+				-4.9
1,437,357	+				+1.6
1,437,365	-				-0.0
1,437,365	-				+2.9
1,437,481	-				-0.0
1,437,488	+				-0.1
1,437,491	-				+0.0
1,437,626	-				-0.6
1,437,648	-				-0.4
1,437,680	+				+0.8
1,437,698	+				-0.4
1,437,711	-				-2.2
1,437,718	-				-0.1
1,437,742	-				-2.7
1,437,816	+		MIT1002_01297	0.13	+0.6
1,437,822	-		MIT1002_01297	0.13	+0.8
1,437,824	-		MIT1002_01297	0.13	-2.7
1,437,860	-		MIT1002_01297	0.15	+0.0
1,437,860	-		MIT1002_01297	0.15	+0.6
1,437,889	-		MIT1002_01297	0.16	+0.9
1,437,934	+		MIT1002_01297	0.19	+0.3
1,437,939	+		MIT1002_01297	0.19	+0.4
1,437,944	+		MIT1002_01297	0.19	+0.3
1,437,946	+		MIT1002_01297	0.19	+0.9
1,437,947	-		MIT1002_01297	0.19	+0.1
1,437,997	-		MIT1002_01297	0.22	+0.2
1,437,998	-		MIT1002_01297	0.22	+1.0
1,438,041	+		MIT1002_01297	0.24	+1.8
1,438,043	+		MIT1002_01297	0.24	-1.2
1,438,049	-		MIT1002_01297	0.24	-0.6
1,438,084	-		MIT1002_01297	0.26	+1.4
1,438,088	-		MIT1002_01297	0.26	-0.1
1,438,088	-		MIT1002_01297	0.26	+2.7
1,438,110	+		MIT1002_01297	0.27	+0.2
1,438,187	+		MIT1002_01297	0.31	-1.4
1,438,226	+		MIT1002_01297	0.33	+0.4
1,438,241	-		MIT1002_01297	0.33	-0.8
1,438,241	-		MIT1002_01297	0.33	+0.3
1,438,241	-		MIT1002_01297	0.33	-1.0
1,438,309	-		MIT1002_01297	0.37	-0.4
1,438,314	-		MIT1002_01297	0.37	-1.2
1,438,323	+		MIT1002_01297	0.37	-1.2
1,438,408	+		MIT1002_01297	0.41	+0.1
1,438,411	-		MIT1002_01297	0.42	+0.7
1,438,463	+		MIT1002_01297	0.44	+0.1
1,438,473	+		MIT1002_01297	0.45	-1.1
1,438,473	+		MIT1002_01297	0.45	+0.5
1,438,481	-		MIT1002_01297	0.45	-0.4
1,438,552	-		MIT1002_01297	0.48	+0.9
1,438,591	+		MIT1002_01297	0.50	+0.2
1,438,621	+		MIT1002_01297	0.52	-2.8
1,438,661	+		MIT1002_01297	0.54	+0.3
1,438,729	-		MIT1002_01297	0.57	+1.0
1,438,729	-		MIT1002_01297	0.57	+0.4
1,438,729	-		MIT1002_01297	0.57	+0.4
1,438,729	-		MIT1002_01297	0.57	+0.8
1,438,729	-		MIT1002_01297	0.57	+0.7
1,438,729	-		MIT1002_01297	0.57	-0.2
1,438,739	-		MIT1002_01297	0.57	+0.4
1,438,739	-		MIT1002_01297	0.57	+1.1
1,438,739	-		MIT1002_01297	0.57	+0.0
1,438,744	-		MIT1002_01297	0.58	+0.7
1,438,744	-		MIT1002_01297	0.58	+0.2
1,438,744	-		MIT1002_01297	0.58	+0.4
1,438,748	+		MIT1002_01297	0.58	+1.2
1,438,776	+		MIT1002_01297	0.59	+1.2
1,438,777	-		MIT1002_01297	0.59	+0.9
1,438,878	-		MIT1002_01297	0.64	+0.1
1,438,878	-		MIT1002_01297	0.64	-1.9
1,438,878	-		MIT1002_01297	0.64	+0.1
1,438,878	-		MIT1002_01297	0.64	+0.5
1,438,889	+		MIT1002_01297	0.65	+0.8
1,438,896	-		MIT1002_01297	0.65	-0.7
1,438,897	-		MIT1002_01297	0.65	+0.7
1,438,966	-		MIT1002_01297	0.68	-1.1
1,438,966	-		MIT1002_01297	0.68	+0.3
1,438,966	-		MIT1002_01297	0.68	+1.0
1,439,016	+		MIT1002_01297	0.71	+2.3
1,439,065	+		MIT1002_01297	0.73	-0.8
1,439,065	+		MIT1002_01297	0.73	+0.4
1,439,081	+		MIT1002_01297	0.74	-1.1
1,439,098	+		MIT1002_01297	0.75	+0.0
1,439,098	+		MIT1002_01297	0.75	+0.9
1,439,108	-		MIT1002_01297	0.75	-0.1
1,439,278	+		MIT1002_01297	0.84	+0.6
1,439,286	-		MIT1002_01297	0.84	+0.4
1,439,322	+		MIT1002_01297	0.86	+1.2
1,439,327	+		MIT1002_01297	0.86	+0.5
1,439,335	-		MIT1002_01297	0.86	+0.0
1,439,340	-		MIT1002_01297	0.87	+0.2
1,439,405	+		MIT1002_01297	0.90	-0.1
1,439,428	+				+0.4
1,439,440	-				+1.0
1,439,441	-				-0.4
1,439,443	+				+1.6
1,439,448	+				-0.3
1,439,457	+				+0.7
1,439,472	+				+1.5
1,439,570	-				+0.7
1,439,580	-				+0.1
1,439,637	+				+0.5
1,439,641	-				-0.1
1,439,681	-				+1.1
1,439,708	-				-0.4
1,439,708	-				-0.3
1,439,748	+				+0.9
1,439,780	+				+0.9
1,439,839	-				-1.0
1,439,843	-				+0.2
1,439,861	-				+0.5
1,439,900	+				-1.2
1,439,916	+				-1.1
1,439,924	-				+1.5
1,439,946	+				+0.7
1,439,949	-				-0.2
1,439,966	-				-0.2
1,439,982	-				+0.1
1,440,023	+				-2.0
1,440,125	+				+0.7
1,440,149	+				-1.5
1,440,222	+				-0.4
1,440,240	-				+0.2
1,440,240	-				-2.2
1,440,331	+				-1.6
1,440,331	+				-0.2
1,440,339	-				+0.8
1,440,339	-				-0.6
1,440,339	-				+1.5
1,440,349	-		MIT1002_01298	0.10	+1.4
1,440,390	-		MIT1002_01298	0.11	-1.8
1,440,437	+		MIT1002_01298	0.13	+1.0
1,440,450	+		MIT1002_01298	0.13	-1.7