Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16425

Experiment: biofilm; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Aluminum chloride 1mM
3,616,598	-				+1.0
3,616,710	+				-2.4
3,616,710	+				-0.5
3,616,710	+				+2.4
3,616,710	+				-0.2
3,616,710	+				-0.8
3,616,710	+				+0.5
3,616,710	+				+3.3
3,616,710	+				+2.0
3,616,710	+				-0.8
3,616,710	+				-0.8
3,616,710	+				+0.5
3,616,710	+				-2.6
3,616,710	+				+0.5
3,616,710	+				+1.1
3,616,710	+				+1.5
3,616,710	+				+2.4
3,616,710	+				-1.3
3,616,711	-				-2.2
3,616,711	-				-0.0
3,616,711	-				+0.2
3,616,711	-				+0.2
3,616,711	-				+0.5
3,616,711	-				-0.5
3,616,711	-				-0.3
3,616,711	-				-1.5
3,616,711	-				-1.8
3,616,711	-				+0.3
3,616,711	-				-2.5
3,616,711	-				-2.4
3,616,711	-				+0.7
3,616,711	-				-2.2
3,616,711	-				-0.0
3,616,711	-				-0.9
3,616,907	+		LRK53_RS16420	0.27	-0.5
3,616,907	+		LRK53_RS16420	0.27	-0.6
3,616,907	+		LRK53_RS16420	0.27	+1.7
3,616,907	+		LRK53_RS16420	0.27	-0.4
3,616,908	-		LRK53_RS16420	0.27	+0.6
3,616,908	-		LRK53_RS16420	0.27	-1.0
3,616,908	-		LRK53_RS16420	0.27	+0.1
3,616,908	-		LRK53_RS16420	0.27	+1.7
3,616,908	-		LRK53_RS16420	0.27	-1.6
3,616,908	-		LRK53_RS16420	0.27	-1.5
3,616,908	-		LRK53_RS16420	0.27	-2.0
3,616,908	-		LRK53_RS16420	0.27	-1.9
3,616,931	+		LRK53_RS16420	0.29	-1.9
3,616,931	+		LRK53_RS16420	0.29	-1.0
3,616,931	+		LRK53_RS16420	0.29	+1.0
3,616,931	+		LRK53_RS16420	0.29	-0.0
3,616,931	+		LRK53_RS16420	0.29	+2.0
3,616,931	+		LRK53_RS16420	0.29	+0.2
3,616,931	+		LRK53_RS16420	0.29	+0.7
3,616,931	+		LRK53_RS16420	0.29	-0.0
3,616,931	+		LRK53_RS16420	0.29	-1.2
3,616,932	-		LRK53_RS16420	0.29	+0.8
3,616,932	-		LRK53_RS16420	0.29	-2.6
3,616,932	-		LRK53_RS16420	0.29	-0.7
3,616,932	-		LRK53_RS16420	0.29	-1.6
3,616,932	-		LRK53_RS16420	0.29	-0.0
3,616,932	-		LRK53_RS16420	0.29	-1.3
3,616,932	-		LRK53_RS16420	0.29	-3.0
3,616,932	-		LRK53_RS16420	0.29	-0.5
3,616,932	-		LRK53_RS16420	0.29	-0.8
3,616,932	-		LRK53_RS16420	0.29	-0.2
3,616,932	-		LRK53_RS16420	0.29	-0.3
3,616,932	-		LRK53_RS16420	0.29	+1.9
3,616,932	-		LRK53_RS16420	0.29	-2.5
3,616,932	-		LRK53_RS16420	0.29	-0.5
3,616,932	-		LRK53_RS16420	0.29	-0.6
3,616,932	-		LRK53_RS16420	0.29	-2.2
3,616,993	-		LRK53_RS16420	0.36	+0.2
3,617,048	+		LRK53_RS16420	0.42	-0.6
3,617,048	+		LRK53_RS16420	0.42	+0.5
3,617,048	+		LRK53_RS16420	0.42	-0.3
3,617,048	+		LRK53_RS16420	0.42	-1.6
3,617,048	+		LRK53_RS16420	0.42	-1.5
3,617,048	+		LRK53_RS16420	0.42	-1.5
3,617,048	+		LRK53_RS16420	0.42	-1.0
3,617,048	+		LRK53_RS16420	0.42	+0.3
3,617,048	+		LRK53_RS16420	0.42	-1.0
3,617,048	+		LRK53_RS16420	0.42	+0.8
3,617,048	+		LRK53_RS16420	0.42	-0.1
3,617,048	+		LRK53_RS16420	0.42	-0.3
3,617,048	+		LRK53_RS16420	0.42	-1.6
3,617,048	+		LRK53_RS16420	0.42	-1.6
3,617,048	+		LRK53_RS16420	0.42	+0.3
3,617,048	+		LRK53_RS16420	0.42	-1.0
3,617,048	+		LRK53_RS16420	0.42	+2.2
3,617,048	+		LRK53_RS16420	0.42	-1.4
3,617,048	+		LRK53_RS16420	0.42	-0.8
3,617,048	+		LRK53_RS16420	0.42	-1.2
3,617,048	+		LRK53_RS16420	0.42	-0.6
3,617,048	+		LRK53_RS16420	0.42	-1.0
3,617,048	+		LRK53_RS16420	0.42	+1.8
3,617,049	-		LRK53_RS16420	0.42	-0.6
3,617,049	-		LRK53_RS16420	0.42	-1.2
3,617,049	-		LRK53_RS16420	0.42	-2.3
3,617,049	-		LRK53_RS16420	0.42	-3.3
3,617,049	-		LRK53_RS16420	0.42	-0.0
3,617,049	-		LRK53_RS16420	0.42	+0.7
3,617,049	-		LRK53_RS16420	0.42	+2.1
3,617,049	-		LRK53_RS16420	0.42	-0.7
3,617,049	-		LRK53_RS16420	0.42	+0.4
3,617,049	-		LRK53_RS16420	0.42	-0.0
3,617,049	-		LRK53_RS16420	0.42	-0.5
3,617,049	-		LRK53_RS16420	0.42	+1.3
3,617,049	-		LRK53_RS16420	0.42	-0.8
3,617,049	-		LRK53_RS16420	0.42	-0.7
3,617,049	-		LRK53_RS16420	0.42	-0.6
3,617,049	-		LRK53_RS16420	0.42	-1.4
3,617,049	-		LRK53_RS16420	0.42	-0.6
3,617,049	-		LRK53_RS16420	0.42	-0.6
3,617,049	-		LRK53_RS16420	0.42	-0.6
3,617,151	+		LRK53_RS16420	0.53	-1.0
3,617,151	+		LRK53_RS16420	0.53	-2.5
3,617,166	+		LRK53_RS16420	0.55	-0.8
3,617,166	+		LRK53_RS16420	0.55	-1.1
3,617,166	+		LRK53_RS16420	0.55	+0.0
3,617,166	+		LRK53_RS16420	0.55	-0.3
3,617,166	+		LRK53_RS16420	0.55	+0.5
3,617,167	-		LRK53_RS16420	0.55	+0.7
3,617,276	-		LRK53_RS16420	0.67	-1.7
3,617,299	+		LRK53_RS16420	0.69	+1.0
3,617,299	+		LRK53_RS16420	0.69	-1.0
3,617,300	-		LRK53_RS16420	0.69	-0.6
3,617,300	-		LRK53_RS16420	0.69	-0.2
3,617,300	-		LRK53_RS16420	0.69	+0.2
3,617,300	-		LRK53_RS16420	0.69	-2.6
3,617,300	-		LRK53_RS16420	0.69	+0.6
3,617,300	-		LRK53_RS16420	0.69	+0.3
3,617,300	-		LRK53_RS16420	0.69	-2.3
3,617,328	+		LRK53_RS16420	0.72	-0.7
3,617,329	-		LRK53_RS16420	0.72	-3.3
3,617,358	+		LRK53_RS16420	0.75	-0.8
3,617,667	-				-2.8
3,617,667	-				-1.3
3,617,878	+		LRK53_RS16425	0.24	-0.3
3,617,878	+		LRK53_RS16425	0.24	-2.1
3,617,878	+		LRK53_RS16425	0.24	-2.1
3,617,878	+		LRK53_RS16425	0.24	-0.7
3,617,879	-		LRK53_RS16425	0.24	-3.1
3,617,879	-		LRK53_RS16425	0.24	+1.1
3,617,879	-		LRK53_RS16425	0.24	-1.4
3,617,879	-		LRK53_RS16425	0.24	-1.8
3,617,879	-		LRK53_RS16425	0.24	-1.0
3,617,879	-		LRK53_RS16425	0.24	+1.1
3,617,879	-		LRK53_RS16425	0.24	-0.2
3,617,894	+		LRK53_RS16425	0.26	-1.7
3,617,962	+		LRK53_RS16425	0.31	+0.9
3,617,962	+		LRK53_RS16425	0.31	+0.4
3,617,962	+		LRK53_RS16425	0.31	-2.0
3,617,963	-		LRK53_RS16425	0.31	+0.4
3,617,963	-		LRK53_RS16425	0.31	-0.5
3,617,986	-		LRK53_RS16425	0.33	-0.6
3,618,026	-		LRK53_RS16425	0.37	-1.3
3,618,026	-		LRK53_RS16425	0.37	+3.0
3,618,065	-		LRK53_RS16425	0.40	-1.4
3,618,073	+		LRK53_RS16425	0.41	-1.4
3,618,074	-		LRK53_RS16425	0.41	-1.3
3,618,148	+		LRK53_RS16425	0.47	-1.2
3,618,149	-		LRK53_RS16425	0.47	-1.8
3,618,149	-		LRK53_RS16425	0.47	-0.9
3,618,162	+		LRK53_RS16425	0.48	-0.6
3,618,162	+		LRK53_RS16425	0.48	-0.6
3,618,162	+		LRK53_RS16425	0.48	-1.0
3,618,163	-		LRK53_RS16425	0.48	-2.4
3,618,163	-		LRK53_RS16425	0.48	-3.9
3,618,163	-		LRK53_RS16425	0.48	+1.0
3,618,163	-		LRK53_RS16425	0.48	-0.1
3,618,163	-		LRK53_RS16425	0.48	-2.3
3,618,189	+		LRK53_RS16425	0.50	+0.4
3,618,189	+		LRK53_RS16425	0.50	-0.7
3,618,189	+		LRK53_RS16425	0.50	-0.6
3,618,190	-		LRK53_RS16425	0.50	-0.0
3,618,190	-		LRK53_RS16425	0.50	-1.8
3,618,190	-		LRK53_RS16425	0.50	-2.9
3,618,190	-		LRK53_RS16425	0.50	-1.0
3,618,341	+		LRK53_RS16425	0.63	-0.9
3,618,342	-		LRK53_RS16425	0.63	-2.4
3,618,474	-		LRK53_RS16425	0.74	-1.5
3,618,498	-		LRK53_RS16425	0.76	+0.4
3,618,517	-		LRK53_RS16425	0.78	-0.5
3,618,517	-		LRK53_RS16425	0.78	-0.9
3,618,601	+		LRK53_RS16425	0.85	-0.0
3,618,602	-		LRK53_RS16425	0.85	-0.0
3,618,602	-		LRK53_RS16425	0.85	-0.2
3,618,740	+				-0.4
3,618,740	+				-0.3
3,618,741	-				-0.3
3,618,741	-				-1.8
3,618,756	+				+2.3
3,618,756	+				-3.7
3,618,756	+				-1.7
3,618,756	+				-0.2
3,618,757	-				+0.4
3,618,757	-				-0.7
3,618,763	-				-0.5
3,618,848	+				+0.8
3,618,848	+				-0.4
3,618,848	+				-2.2
3,618,849	-				+0.8
3,618,882	+				-0.7
3,618,883	-				-1.6
3,618,897	+				-0.3
3,618,897	+				-1.3
3,618,898	-				-1.8
3,618,898	-				-0.0
3,618,964	+				-0.7
3,618,965	-				-2.2
3,618,992	+				-0.8
3,618,992	+				-2.4
3,618,992	+				-2.6
3,618,992	+				-0.5
3,618,992	+				-0.1
3,618,993	-				+0.7
3,618,993	-				+0.4
3,618,993	-				+2.2
3,618,993	-				+0.2
3,618,993	-				-1.4
3,618,995	+				-2.4
3,618,995	+				-1.1
3,619,158	-		LRK53_RS16430	0.51	+0.2
3,619,158	-		LRK53_RS16430	0.51	-1.5
3,619,301	+		LRK53_RS16430	0.87	-1.0
3,619,301	+		LRK53_RS16430	0.87	+0.2
3,619,301	+		LRK53_RS16430	0.87	-1.7
3,619,301	+		LRK53_RS16430	0.87	-1.4
3,619,302	-		LRK53_RS16430	0.88	-1.9
3,619,302	-		LRK53_RS16430	0.88	-2.7
3,619,302	-		LRK53_RS16430	0.88	-1.2
3,619,302	-		LRK53_RS16430	0.88	+0.6
3,619,387	+				-1.9
3,619,388	-				-3.5
3,619,420	+				-1.8
3,619,433	+				-1.6
3,619,434	-				+0.5
3,619,440	+				-2.2
3,619,441	-				-1.3
3,619,525	+		LRK53_RS16435	0.21	+0.2
3,619,525	+		LRK53_RS16435	0.21	-0.1
3,619,525	+		LRK53_RS16435	0.21	-0.0
3,619,525	+		LRK53_RS16435	0.21	+1.4
3,619,525	+		LRK53_RS16435	0.21	-0.3
3,619,525	+		LRK53_RS16435	0.21	+0.8
3,619,525	+		LRK53_RS16435	0.21	-1.2
3,619,525	+		LRK53_RS16435	0.21	-1.9
3,619,525	+		LRK53_RS16435	0.21	-1.5
3,619,525	+		LRK53_RS16435	0.21	-0.0
3,619,525	+		LRK53_RS16435	0.21	+0.5
3,619,526	-		LRK53_RS16435	0.21	-0.2
3,619,526	-		LRK53_RS16435	0.21	-0.0
3,619,526	-		LRK53_RS16435	0.21	-1.3
3,619,526	-		LRK53_RS16435	0.21	+0.2
3,619,526	-		LRK53_RS16435	0.21	+0.1
3,619,648	-		LRK53_RS16435	0.37	-0.6
3,619,648	-		LRK53_RS16435	0.37	-0.8
3,619,648	-		LRK53_RS16435	0.37	-0.7
3,619,648	-		LRK53_RS16435	0.37	-0.6
3,619,648	-		LRK53_RS16435	0.37	-2.0
3,619,648	-		LRK53_RS16435	0.37	-1.3
3,619,711	+		LRK53_RS16435	0.46	+0.3
3,619,733	-		LRK53_RS16435	0.49	+0.4