Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04480

Experiment: biofilm; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Aluminum chloride 1mM
1,039,049	+		LRK53_RS04475	0.51	-1.1
1,039,065	-		LRK53_RS04475	0.52	-0.9
1,039,065	-		LRK53_RS04475	0.52	-1.0
1,039,082	+		LRK53_RS04475	0.53	+1.1
1,039,082	+		LRK53_RS04475	0.53	-0.9
1,039,083	-		LRK53_RS04475	0.53	+0.0
1,039,115	+		LRK53_RS04475	0.55	+0.7
1,039,115	+		LRK53_RS04475	0.55	+0.4
1,039,115	+		LRK53_RS04475	0.55	-0.3
1,039,115	+		LRK53_RS04475	0.55	-1.4
1,039,115	+		LRK53_RS04475	0.55	+0.1
1,039,115	+		LRK53_RS04475	0.55	-0.2
1,039,115	+		LRK53_RS04475	0.55	-0.7
1,039,115	+		LRK53_RS04475	0.55	-0.4
1,039,115	+		LRK53_RS04475	0.55	-0.7
1,039,115	+		LRK53_RS04475	0.55	+0.5
1,039,116	-		LRK53_RS04475	0.55	-0.6
1,039,116	-		LRK53_RS04475	0.55	-0.1
1,039,116	-		LRK53_RS04475	0.55	-0.4
1,039,116	-		LRK53_RS04475	0.55	+1.1
1,039,116	-		LRK53_RS04475	0.55	-1.1
1,039,116	-		LRK53_RS04475	0.55	-1.1
1,039,116	-		LRK53_RS04475	0.55	-0.7
1,039,116	-		LRK53_RS04475	0.55	-2.9
1,039,116	-		LRK53_RS04475	0.55	-0.3
1,039,116	-		LRK53_RS04475	0.55	-1.8
1,039,116	-		LRK53_RS04475	0.55	-0.4
1,039,116	-		LRK53_RS04475	0.55	-0.7
1,039,116	-		LRK53_RS04475	0.55	+0.4
1,039,116	-		LRK53_RS04475	0.55	-1.8
1,039,116	-		LRK53_RS04475	0.55	-0.7
1,039,133	+		LRK53_RS04475	0.56	-1.2
1,039,134	-		LRK53_RS04475	0.56	+0.4
1,039,137	+		LRK53_RS04475	0.56	-1.5
1,039,137	+		LRK53_RS04475	0.56	+0.4
1,039,137	+		LRK53_RS04475	0.56	-0.4
1,039,137	+		LRK53_RS04475	0.56	+0.1
1,039,137	+		LRK53_RS04475	0.56	-1.1
1,039,137	+		LRK53_RS04475	0.56	+1.8
1,039,137	+		LRK53_RS04475	0.56	+1.5
1,039,137	+		LRK53_RS04475	0.56	-0.7
1,039,137	+		LRK53_RS04475	0.56	-0.1
1,039,137	+		LRK53_RS04475	0.56	+0.1
1,039,137	+		LRK53_RS04475	0.56	-2.3
1,039,137	+		LRK53_RS04475	0.56	+1.6
1,039,137	+		LRK53_RS04475	0.56	+1.5
1,039,137	+		LRK53_RS04475	0.56	+1.7
1,039,137	+		LRK53_RS04475	0.56	-1.5
1,039,138	-		LRK53_RS04475	0.56	-0.4
1,039,138	-		LRK53_RS04475	0.56	-1.0
1,039,138	-		LRK53_RS04475	0.56	-0.3
1,039,138	-		LRK53_RS04475	0.56	-0.9
1,039,138	-		LRK53_RS04475	0.56	-0.5
1,039,138	-		LRK53_RS04475	0.56	-0.3
1,039,138	-		LRK53_RS04475	0.56	-2.0
1,039,138	-		LRK53_RS04475	0.56	+0.1
1,039,138	-		LRK53_RS04475	0.56	-0.7
1,039,138	-		LRK53_RS04475	0.56	-0.2
1,039,138	-		LRK53_RS04475	0.56	-0.3
1,039,138	-		LRK53_RS04475	0.56	+0.0
1,039,138	-		LRK53_RS04475	0.56	-0.1
1,039,138	-		LRK53_RS04475	0.56	+0.0
1,039,138	-		LRK53_RS04475	0.56	-0.3
1,039,138	-		LRK53_RS04475	0.56	-0.2
1,039,233	-		LRK53_RS04475	0.62	+2.1
1,039,352	+		LRK53_RS04475	0.69	-1.2
1,039,353	-		LRK53_RS04475	0.69	-0.3
1,039,430	+		LRK53_RS04475	0.74	-1.1
1,039,430	+		LRK53_RS04475	0.74	+0.1
1,039,430	+		LRK53_RS04475	0.74	-0.4
1,039,430	+		LRK53_RS04475	0.74	-1.4
1,039,430	+		LRK53_RS04475	0.74	-0.7
1,039,430	+		LRK53_RS04475	0.74	-0.1
1,039,430	+		LRK53_RS04475	0.74	-1.0
1,039,430	+		LRK53_RS04475	0.74	+4.1
1,039,430	+		LRK53_RS04475	0.74	+1.1
1,039,430	+		LRK53_RS04475	0.74	-0.6
1,039,431	-		LRK53_RS04475	0.74	+3.5
1,039,431	-		LRK53_RS04475	0.74	-0.7
1,039,431	-		LRK53_RS04475	0.74	-0.4
1,039,431	-		LRK53_RS04475	0.74	+0.3
1,039,431	-		LRK53_RS04475	0.74	-1.0
1,039,431	-		LRK53_RS04475	0.74	-1.2
1,039,431	-		LRK53_RS04475	0.74	+1.5
1,039,431	-		LRK53_RS04475	0.74	-1.7
1,039,820	+				-1.0
1,039,820	+				-0.4
1,039,820	+				+2.7
1,039,820	+				-0.9
1,039,820	+				-1.6
1,039,820	+				-1.5
1,039,821	-				-0.7
1,039,821	-				+0.3
1,039,821	-				-0.6
1,039,821	-				+0.1
1,039,821	-				-0.1
1,039,821	-				-0.4
1,039,821	-				-1.8
1,039,821	-				-1.2
1,039,896	+				-2.1
1,039,896	+				-0.2
1,039,988	-				-0.6
1,040,123	+				-0.7
1,040,123	+				-0.4
1,040,123	+				-1.7
1,040,123	+				+0.7
1,040,124	-				+1.7
1,040,124	-				-1.3
1,040,165	+		LRK53_RS04480	0.11	-1.1
1,040,165	+		LRK53_RS04480	0.11	-0.3
1,040,165	+		LRK53_RS04480	0.11	-0.9
1,040,165	+		LRK53_RS04480	0.11	-0.1
1,040,165	+		LRK53_RS04480	0.11	-2.5
1,040,165	+		LRK53_RS04480	0.11	+3.0
1,040,165	+		LRK53_RS04480	0.11	-0.7
1,040,165	+		LRK53_RS04480	0.11	-0.1
1,040,166	-		LRK53_RS04480	0.11	-2.9
1,040,166	-		LRK53_RS04480	0.11	-2.1
1,040,166	-		LRK53_RS04480	0.11	+0.4
1,040,166	-		LRK53_RS04480	0.11	+0.1
1,040,166	-		LRK53_RS04480	0.11	-1.4
1,040,166	-		LRK53_RS04480	0.11	+0.4
1,040,166	-		LRK53_RS04480	0.11	+2.3
1,040,166	-		LRK53_RS04480	0.11	-0.3
1,040,166	-		LRK53_RS04480	0.11	+0.1
1,040,166	-		LRK53_RS04480	0.11	+1.3
1,040,166	-		LRK53_RS04480	0.11	-0.3
1,040,477	+		LRK53_RS04480	0.33	-0.9
1,040,585	+		LRK53_RS04480	0.41	-1.4
1,040,585	+		LRK53_RS04480	0.41	-0.3
1,040,586	-		LRK53_RS04480	0.41	+0.7
1,040,597	+		LRK53_RS04480	0.42	+0.1
1,041,083	+		LRK53_RS04480	0.77	+0.1
1,041,083	+		LRK53_RS04480	0.77	+0.1
1,041,083	+		LRK53_RS04480	0.77	-0.4
1,041,083	+		LRK53_RS04480	0.77	+1.3
1,041,084	-		LRK53_RS04480	0.77	-1.0
1,041,084	-		LRK53_RS04480	0.77	-1.0
1,041,464	-				-0.8
1,041,641	+				-1.4
1,041,641	+				-1.0
1,041,642	-				+0.1
1,041,642	-				-2.2
1,041,720	+				-1.0
1,041,720	+				-0.8
1,041,720	+				-1.2
1,041,720	+				-1.1
1,041,720	+				-1.0
1,041,720	+				-1.3
1,041,720	+				-0.1
1,041,720	+				-1.3
1,041,720	+				-0.2
1,041,721	-				+0.6
1,041,721	-				+0.4
1,041,721	-				+2.1
1,041,721	-				-1.1
1,041,721	-				-1.7
1,041,721	-				+1.3
1,041,721	-				-1.6
1,041,721	-				-0.4
1,041,721	-				-0.6
1,041,721	-				-1.9
1,041,721	-				-2.0
1,041,721	-				-0.9
1,041,721	-				-1.4
1,041,721	-				-2.6
1,041,721	-				-1.9
1,041,721	-				-0.1
1,041,729	+				-0.4
1,041,729	+				-0.7
1,041,729	+				+0.1
1,041,729	+				-1.0
1,041,729	+				-0.7
1,041,729	+				+2.0
1,041,729	+				-0.2
1,041,729	+				-0.1
1,041,729	+				-1.4
1,041,729	+				-0.2
1,041,730	-				-3.2
1,041,730	-				-1.8
1,041,730	-				+2.1
1,041,730	-				-0.3
1,041,730	-				+0.4
1,041,730	-				-2.2
1,041,730	-				-0.4
1,041,730	-				-1.2
1,041,730	-				-0.6
1,041,754	+				+0.3
1,041,754	+				-0.7
1,041,755	-				-1.5
1,041,782	-				-0.1
1,041,945	+		LRK53_RS04485	0.11	+0.9
1,041,946	-		LRK53_RS04485	0.11	-0.2
1,041,952	+		LRK53_RS04485	0.12	-0.3
1,041,952	+		LRK53_RS04485	0.12	-0.5
1,041,952	+		LRK53_RS04485	0.12	-2.1
1,041,952	+		LRK53_RS04485	0.12	-2.1
1,041,952	+		LRK53_RS04485	0.12	-0.4
1,041,952	+		LRK53_RS04485	0.12	-0.3
1,041,952	+		LRK53_RS04485	0.12	-2.1
1,041,952	+		LRK53_RS04485	0.12	-2.4
1,041,952	+		LRK53_RS04485	0.12	-1.2
1,041,953	-		LRK53_RS04485	0.12	-1.2
1,041,953	-		LRK53_RS04485	0.12	-0.4
1,041,953	-		LRK53_RS04485	0.12	-1.9
1,041,953	-		LRK53_RS04485	0.12	+0.6
1,041,953	-		LRK53_RS04485	0.12	-3.5
1,041,953	-		LRK53_RS04485	0.12	+1.2
1,042,006	+		LRK53_RS04485	0.18	+0.1
1,042,006	+		LRK53_RS04485	0.18	-0.6
1,042,229	-		LRK53_RS04485	0.42	-0.1
1,042,359	+		LRK53_RS04485	0.56	-0.4
1,042,359	+		LRK53_RS04485	0.56	-0.4
1,042,359	+		LRK53_RS04485	0.56	-0.9
1,042,359	+		LRK53_RS04485	0.56	-0.6
1,042,359	+		LRK53_RS04485	0.56	-1.3
1,042,359	+		LRK53_RS04485	0.56	-0.4
1,042,359	+		LRK53_RS04485	0.56	-1.0
1,042,359	+		LRK53_RS04485	0.56	+0.3
1,042,359	+		LRK53_RS04485	0.56	-2.4
1,042,359	+		LRK53_RS04485	0.56	-1.5
1,042,359	+		LRK53_RS04485	0.56	-1.3
1,042,359	+		LRK53_RS04485	0.56	-1.9
1,042,359	+		LRK53_RS04485	0.56	-0.2
1,042,359	+		LRK53_RS04485	0.56	+0.9
1,042,359	+		LRK53_RS04485	0.56	-1.4
1,042,359	+		LRK53_RS04485	0.56	-1.8
1,042,359	+		LRK53_RS04485	0.56	+1.0
1,042,359	+		LRK53_RS04485	0.56	-0.3
1,042,359	+		LRK53_RS04485	0.56	-0.3
1,042,359	+		LRK53_RS04485	0.56	-0.3
1,042,359	+		LRK53_RS04485	0.56	-2.2
1,042,359	+		LRK53_RS04485	0.56	-1.1
1,042,360	-		LRK53_RS04485	0.56	-0.5
1,042,360	-		LRK53_RS04485	0.56	-1.1
1,042,360	-		LRK53_RS04485	0.56	-1.3
1,042,360	-		LRK53_RS04485	0.56	+0.2
1,042,360	-		LRK53_RS04485	0.56	-0.3
1,042,360	-		LRK53_RS04485	0.56	-0.1
1,042,360	-		LRK53_RS04485	0.56	-1.0
1,042,360	-		LRK53_RS04485	0.56	-1.9
1,042,360	-		LRK53_RS04485	0.56	-2.4
1,042,360	-		LRK53_RS04485	0.56	-1.4
1,042,360	-		LRK53_RS04485	0.56	-0.0
1,042,360	-		LRK53_RS04485	0.56	+2.2
1,042,360	-		LRK53_RS04485	0.56	-1.7
1,042,360	-		LRK53_RS04485	0.56	+1.2
1,042,360	-		LRK53_RS04485	0.56	-2.4
1,042,360	-		LRK53_RS04485	0.56	-0.0
1,042,360	-		LRK53_RS04485	0.56	-0.9
1,042,360	-		LRK53_RS04485	0.56	-1.4
1,042,360	-		LRK53_RS04485	0.56	+0.0
1,042,360	-		LRK53_RS04485	0.56	+0.2
1,042,360	-		LRK53_RS04485	0.56	-1.1
1,042,360	-		LRK53_RS04485	0.56	-1.3
1,042,360	-		LRK53_RS04485	0.56	-0.1
1,042,360	-		LRK53_RS04485	0.56	+0.4
1,042,360	-		LRK53_RS04485	0.56	-2.6
1,042,363	+		LRK53_RS04485	0.57	+0.3
1,042,363	+		LRK53_RS04485	0.57	-1.4
1,042,363	+		LRK53_RS04485	0.57	-1.7
1,042,363	+		LRK53_RS04485	0.57	-0.9
1,042,363	+		LRK53_RS04485	0.57	-1.7
1,042,363	+		LRK53_RS04485	0.57	-0.1
1,042,363	+		LRK53_RS04485	0.57	+1.0
1,042,363	+		LRK53_RS04485	0.57	+1.6
1,042,363	+		LRK53_RS04485	0.57	-0.9
1,042,363	+		LRK53_RS04485	0.57	-1.7
1,042,363	+		LRK53_RS04485	0.57	-0.5
1,042,363	+		LRK53_RS04485	0.57	+0.1
1,042,363	+		LRK53_RS04485	0.57	-1.5
1,042,363	+		LRK53_RS04485	0.57	-1.1
1,042,363	+		LRK53_RS04485	0.57	-0.1
1,042,363	+		LRK53_RS04485	0.57	+2.3
1,042,363	+		LRK53_RS04485	0.57	-3.0
1,042,363	+		LRK53_RS04485	0.57	-2.5
1,042,363	+		LRK53_RS04485	0.57	-3.1
1,042,363	+		LRK53_RS04485	0.57	-0.5
1,042,363	+		LRK53_RS04485	0.57	-1.5
1,042,363	+		LRK53_RS04485	0.57	-3.0
1,042,363	+		LRK53_RS04485	0.57	-0.7
1,042,363	+		LRK53_RS04485	0.57	-0.3
1,042,363	+		LRK53_RS04485	0.57	-1.6
1,042,363	+		LRK53_RS04485	0.57	-0.5
1,042,363	+		LRK53_RS04485	0.57	+0.9
1,042,363	+		LRK53_RS04485	0.57	+0.4
1,042,363	+		LRK53_RS04485	0.57	-0.7
1,042,363	+		LRK53_RS04485	0.57	+1.7
1,042,363	+		LRK53_RS04485	0.57	+0.7
1,042,363	+		LRK53_RS04485	0.57	+0.9
1,042,363	+		LRK53_RS04485	0.57	-2.9
1,042,363	+		LRK53_RS04485	0.57	-2.2
1,042,363	+		LRK53_RS04485	0.57	-0.9
1,042,364	-		LRK53_RS04485	0.57	-2.2
1,042,364	-		LRK53_RS04485	0.57	-0.3
1,042,364	-		LRK53_RS04485	0.57	+0.9
1,042,364	-		LRK53_RS04485	0.57	-0.7
1,042,364	-		LRK53_RS04485	0.57	+0.4
1,042,364	-		LRK53_RS04485	0.57	-1.0
1,042,364	-		LRK53_RS04485	0.57	+1.3
1,042,364	-		LRK53_RS04485	0.57	-0.3
1,042,364	-		LRK53_RS04485	0.57	-0.1
1,042,364	-		LRK53_RS04485	0.57	+0.4
1,042,364	-		LRK53_RS04485	0.57	+0.3
1,042,364	-		LRK53_RS04485	0.57	+0.1
1,042,364	-		LRK53_RS04485	0.57	+0.7
1,042,364	-		LRK53_RS04485	0.57	-0.8
1,042,364	-		LRK53_RS04485	0.57	+0.3
1,042,364	-		LRK53_RS04485	0.57	+1.9
1,042,364	-		LRK53_RS04485	0.57	-0.1
1,042,364	-		LRK53_RS04485	0.57	-0.6
1,042,364	-		LRK53_RS04485	0.57	+1.3
1,042,364	-		LRK53_RS04485	0.57	-0.5
1,042,364	-		LRK53_RS04485	0.57	-1.1
1,042,364	-		LRK53_RS04485	0.57	-0.7
1,042,364	-		LRK53_RS04485	0.57	+0.2
1,042,364	-		LRK53_RS04485	0.57	-2.1
1,042,364	-		LRK53_RS04485	0.57	-0.3
1,042,364	-		LRK53_RS04485	0.57	-0.3
1,042,364	-		LRK53_RS04485	0.57	+0.1
1,042,364	-		LRK53_RS04485	0.57	+0.3
1,042,364	-		LRK53_RS04485	0.57	-0.4
1,042,364	-		LRK53_RS04485	0.57	-1.5
1,042,364	-		LRK53_RS04485	0.57	-1.7
1,042,364	-		LRK53_RS04485	0.57	-1.5
1,042,364	-		LRK53_RS04485	0.57	-0.1
1,042,364	-		LRK53_RS04485	0.57	+1.3
1,042,364	-		LRK53_RS04485	0.57	-1.9
1,042,364	-		LRK53_RS04485	0.57	-0.5
1,042,364	-		LRK53_RS04485	0.57	-0.2
1,042,364	-		LRK53_RS04485	0.57	-0.2
1,042,364	-		LRK53_RS04485	0.57	-0.9