Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS10450 and QEN71_RS10455 are separated by 30 nucleotides QEN71_RS10455 and QEN71_RS10460 are separated by 158 nucleotides
QEN71_RS10450: QEN71_RS10450 - nitrate/nitrite transporter, at 2,317,047 to 2,318,309
_RS10450
QEN71_RS10455: QEN71_RS10455 - LysR family transcriptional regulator, at 2,318,340 to 2,319,263
_RS10455
QEN71_RS10460: QEN71_RS10460 - benzoate 1,2-dioxygenase large subunit, at 2,319,422 to 2,320,789
_RS10460
Position (kb)
2318
2319
2320 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2317.351 kb on - strand, within QEN71_RS10450 at 2317.352 kb on + strand, within QEN71_RS10450 at 2317.352 kb on + strand, within QEN71_RS10450 at 2317.722 kb on + strand, within QEN71_RS10450 at 2317.749 kb on - strand, within QEN71_RS10450 at 2317.898 kb on + strand, within QEN71_RS10450 at 2317.899 kb on - strand, within QEN71_RS10450 at 2317.984 kb on + strand, within QEN71_RS10450 at 2318.092 kb on - strand, within QEN71_RS10450 at 2318.158 kb on + strand, within QEN71_RS10450 at 2318.272 kb on - strand at 2318.307 kb on + strand at 2318.307 kb on + strand at 2318.398 kb on + strand at 2318.399 kb on - strand at 2318.525 kb on - strand, within QEN71_RS10455 at 2318.525 kb on - strand, within QEN71_RS10455 at 2318.603 kb on - strand, within QEN71_RS10455 at 2318.606 kb on + strand, within QEN71_RS10455 at 2318.606 kb on + strand, within QEN71_RS10455 at 2318.796 kb on - strand, within QEN71_RS10455 at 2318.796 kb on - strand, within QEN71_RS10455 at 2318.960 kb on - strand, within QEN71_RS10455 at 2318.960 kb on - strand, within QEN71_RS10455 at 2319.167 kb on + strand, within QEN71_RS10455 at 2319.316 kb on + strand at 2319.316 kb on + strand at 2319.316 kb on + strand at 2319.316 kb on + strand at 2319.316 kb on + strand at 2319.317 kb on - strand at 2319.329 kb on + strand at 2319.330 kb on - strand at 2319.585 kb on - strand, within QEN71_RS10460 at 2319.790 kb on + strand, within QEN71_RS10460 at 2320.044 kb on - strand, within QEN71_RS10460
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,317,351 - QEN71_RS10450 0.24 -1.9 2,317,352 + QEN71_RS10450 0.24 +0.9 2,317,352 + QEN71_RS10450 0.24 +1.0 2,317,722 + QEN71_RS10450 0.53 +0.0 2,317,749 - QEN71_RS10450 0.56 +0.0 2,317,898 + QEN71_RS10450 0.67 +0.3 2,317,899 - QEN71_RS10450 0.67 +1.8 2,317,984 + QEN71_RS10450 0.74 +1.1 2,318,092 - QEN71_RS10450 0.83 -0.2 2,318,158 + QEN71_RS10450 0.88 +1.2 2,318,272 - +0.9 2,318,307 + +0.7 2,318,307 + +0.1 2,318,398 + -3.4 2,318,399 - -0.3 2,318,525 - QEN71_RS10455 0.20 -1.0 2,318,525 - QEN71_RS10455 0.20 -0.7 2,318,603 - QEN71_RS10455 0.28 +0.4 2,318,606 + QEN71_RS10455 0.29 -1.0 2,318,606 + QEN71_RS10455 0.29 -1.0 2,318,796 - QEN71_RS10455 0.49 +0.4 2,318,796 - QEN71_RS10455 0.49 -0.9 2,318,960 - QEN71_RS10455 0.67 -1.2 2,318,960 - QEN71_RS10455 0.67 -0.7 2,319,167 + QEN71_RS10455 0.90 +0.5 2,319,316 + -0.9 2,319,316 + -0.5 2,319,316 + -1.0 2,319,316 + -0.3 2,319,316 + +0.9 2,319,317 - +0.0 2,319,329 + +0.7 2,319,330 - -1.0 2,319,585 - QEN71_RS10460 0.12 -0.4 2,319,790 + QEN71_RS10460 0.27 -0.3 2,320,044 - QEN71_RS10460 0.45 +0.9
Or see this region's nucleotide sequence