Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS02685 and QEN71_RS02690 are separated by 57 nucleotides QEN71_RS02690 and QEN71_RS02695 are separated by 306 nucleotides QEN71_RS02695 and QEN71_RS02700 are separated by 63 nucleotides
QEN71_RS02685: QEN71_RS02685 - Lrp/AsnC family transcriptional regulator, at 603,794 to 604,300
_RS02685
QEN71_RS02690: QEN71_RS02690 - flavin reductase family protein, at 604,358 to 604,870
_RS02690
QEN71_RS02695: QEN71_RS02695 - peptide-methionine (S)-S-oxide reductase MsrA, at 605,177 to 605,722
_RS02695
QEN71_RS02700: QEN71_RS02700 - DUF72 domain-containing protein, at 605,786 to 606,868
_RS02700
Position (kb) 605
606 Strain fitness (log2 ratio) -2
-1
0
1
2 at 604.181 kb on + strand, within QEN71_RS02685 at 604.181 kb on + strand, within QEN71_RS02685 at 604.181 kb on + strand, within QEN71_RS02685 at 604.181 kb on + strand, within QEN71_RS02685 at 604.181 kb on + strand, within QEN71_RS02685 at 604.181 kb on + strand, within QEN71_RS02685 at 604.182 kb on - strand, within QEN71_RS02685 at 604.182 kb on - strand, within QEN71_RS02685 at 604.182 kb on - strand, within QEN71_RS02685 at 604.486 kb on - strand, within QEN71_RS02690 at 604.532 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.647 kb on + strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.648 kb on - strand, within QEN71_RS02690 at 604.786 kb on + strand, within QEN71_RS02690 at 604.787 kb on - strand, within QEN71_RS02690 at 604.943 kb on + strand at 604.943 kb on + strand at 604.944 kb on - strand at 604.944 kb on - strand at 605.029 kb on + strand at 605.074 kb on + strand at 605.074 kb on + strand at 605.074 kb on + strand at 605.075 kb on - strand at 605.075 kb on - strand at 605.075 kb on - strand at 605.075 kb on - strand at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.309 kb on + strand, within QEN71_RS02695 at 605.309 kb on + strand, within QEN71_RS02695 at 605.310 kb on - strand, within QEN71_RS02695 at 605.310 kb on - strand, within QEN71_RS02695 at 605.310 kb on - strand, within QEN71_RS02695 at 605.384 kb on + strand, within QEN71_RS02695 at 605.384 kb on + strand, within QEN71_RS02695 at 605.385 kb on - strand, within QEN71_RS02695 at 605.434 kb on + strand, within QEN71_RS02695 at 605.434 kb on + strand, within QEN71_RS02695 at 605.434 kb on + strand, within QEN71_RS02695 at 605.435 kb on - strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.612 kb on + strand, within QEN71_RS02695 at 605.613 kb on - strand, within QEN71_RS02695 at 605.613 kb on - strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.787 kb on + strand at 606.009 kb on + strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.031 kb on - strand, within QEN71_RS02700 at 606.031 kb on - strand, within QEN71_RS02700 at 606.031 kb on - strand, within QEN71_RS02700 at 606.031 kb on - strand, within QEN71_RS02700 at 606.153 kb on + strand, within QEN71_RS02700 at 606.154 kb on - strand, within QEN71_RS02700 at 606.228 kb on + strand, within QEN71_RS02700 at 606.229 kb on - strand, within QEN71_RS02700 at 606.229 kb on - strand, within QEN71_RS02700 at 606.229 kb on - strand, within QEN71_RS02700 at 606.229 kb on - strand, within QEN71_RS02700 at 606.528 kb on + strand, within QEN71_RS02700 at 606.529 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.561 kb on + strand, within QEN71_RS02700 at 606.561 kb on + strand, within QEN71_RS02700 at 606.562 kb on - strand, within QEN71_RS02700 at 606.562 kb on - strand, within QEN71_RS02700 at 606.648 kb on + strand, within QEN71_RS02700 at 606.649 kb on - strand, within QEN71_RS02700 at 606.649 kb on - strand, within QEN71_RS02700 at 606.660 kb on + strand, within QEN71_RS02700 at 606.700 kb on + strand, within QEN71_RS02700 at 606.700 kb on + strand, within QEN71_RS02700 at 606.700 kb on + strand, within QEN71_RS02700 at 606.701 kb on - strand, within QEN71_RS02700
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 604,181 + QEN71_RS02685 0.76 -1.6 604,181 + QEN71_RS02685 0.76 -0.1 604,181 + QEN71_RS02685 0.76 -1.0 604,181 + QEN71_RS02685 0.76 -0.5 604,181 + QEN71_RS02685 0.76 -1.0 604,181 + QEN71_RS02685 0.76 +0.5 604,182 - QEN71_RS02685 0.77 +0.6 604,182 - QEN71_RS02685 0.77 -0.0 604,182 - QEN71_RS02685 0.77 -0.5 604,486 - QEN71_RS02690 0.25 -0.2 604,532 + QEN71_RS02690 0.34 -1.6 604,647 + QEN71_RS02690 0.56 -0.6 604,647 + QEN71_RS02690 0.56 -0.2 604,647 + QEN71_RS02690 0.56 -0.6 604,647 + QEN71_RS02690 0.56 -1.0 604,647 + QEN71_RS02690 0.56 -0.4 604,647 + QEN71_RS02690 0.56 -1.8 604,647 + QEN71_RS02690 0.56 -0.1 604,647 + QEN71_RS02690 0.56 -0.2 604,647 + QEN71_RS02690 0.56 -0.2 604,647 + QEN71_RS02690 0.56 -0.3 604,647 + QEN71_RS02690 0.56 -1.6 604,647 + QEN71_RS02690 0.56 -0.3 604,647 + QEN71_RS02690 0.56 +0.6 604,647 + QEN71_RS02690 0.56 -0.9 604,647 + QEN71_RS02690 0.56 -0.8 604,647 + QEN71_RS02690 0.56 -0.7 604,648 - QEN71_RS02690 0.57 +0.2 604,648 - QEN71_RS02690 0.57 -0.2 604,648 - QEN71_RS02690 0.57 -2.1 604,648 - QEN71_RS02690 0.57 +1.2 604,648 - QEN71_RS02690 0.57 -1.8 604,648 - QEN71_RS02690 0.57 -0.7 604,648 - QEN71_RS02690 0.57 -0.5 604,648 - QEN71_RS02690 0.57 -1.0 604,648 - QEN71_RS02690 0.57 +0.3 604,648 - QEN71_RS02690 0.57 -1.6 604,648 - QEN71_RS02690 0.57 -0.9 604,648 - QEN71_RS02690 0.57 +0.0 604,648 - QEN71_RS02690 0.57 -0.4 604,786 + QEN71_RS02690 0.83 +0.9 604,787 - QEN71_RS02690 0.84 +1.6 604,943 + -1.0 604,943 + -0.4 604,944 - -1.2 604,944 - -0.0 605,029 + +0.6 605,074 + +0.1 605,074 + -0.1 605,074 + +0.4 605,075 - -0.1 605,075 - -0.2 605,075 - -2.3 605,075 - +0.7 605,240 + QEN71_RS02695 0.12 -0.5 605,240 + QEN71_RS02695 0.12 -0.1 605,240 + QEN71_RS02695 0.12 +0.6 605,240 + QEN71_RS02695 0.12 -0.6 605,240 + QEN71_RS02695 0.12 -1.5 605,240 + QEN71_RS02695 0.12 -0.7 605,241 - QEN71_RS02695 0.12 -0.2 605,241 - QEN71_RS02695 0.12 +0.8 605,241 - QEN71_RS02695 0.12 -1.9 605,241 - QEN71_RS02695 0.12 -1.0 605,241 - QEN71_RS02695 0.12 -0.6 605,241 - QEN71_RS02695 0.12 +1.6 605,309 + QEN71_RS02695 0.24 -0.8 605,309 + QEN71_RS02695 0.24 +0.3 605,310 - QEN71_RS02695 0.24 -0.4 605,310 - QEN71_RS02695 0.24 +0.7 605,310 - QEN71_RS02695 0.24 -0.2 605,384 + QEN71_RS02695 0.38 -0.8 605,384 + QEN71_RS02695 0.38 +1.5 605,385 - QEN71_RS02695 0.38 -0.1 605,434 + QEN71_RS02695 0.47 -0.2 605,434 + QEN71_RS02695 0.47 -0.3 605,434 + QEN71_RS02695 0.47 -0.1 605,435 - QEN71_RS02695 0.47 -0.2 605,549 + QEN71_RS02695 0.68 -0.1 605,549 + QEN71_RS02695 0.68 -1.8 605,549 + QEN71_RS02695 0.68 -1.3 605,549 + QEN71_RS02695 0.68 -0.0 605,549 + QEN71_RS02695 0.68 -0.2 605,549 + QEN71_RS02695 0.68 -2.6 605,549 + QEN71_RS02695 0.68 -0.5 605,549 + QEN71_RS02695 0.68 -0.8 605,549 + QEN71_RS02695 0.68 -0.3 605,550 - QEN71_RS02695 0.68 +1.0 605,550 - QEN71_RS02695 0.68 +0.1 605,550 - QEN71_RS02695 0.68 -0.5 605,550 - QEN71_RS02695 0.68 +0.0 605,550 - QEN71_RS02695 0.68 -0.7 605,594 + QEN71_RS02695 0.76 -0.2 605,594 + QEN71_RS02695 0.76 -0.3 605,594 + QEN71_RS02695 0.76 -1.2 605,594 + QEN71_RS02695 0.76 -0.1 605,594 + QEN71_RS02695 0.76 +0.1 605,594 + QEN71_RS02695 0.76 -0.8 605,594 + QEN71_RS02695 0.76 +1.8 605,594 + QEN71_RS02695 0.76 -0.4 605,594 + QEN71_RS02695 0.76 -0.4 605,595 - QEN71_RS02695 0.77 +0.6 605,595 - QEN71_RS02695 0.77 -0.2 605,595 - QEN71_RS02695 0.77 -0.9 605,595 - QEN71_RS02695 0.77 -1.5 605,595 - QEN71_RS02695 0.77 -1.2 605,595 - QEN71_RS02695 0.77 -0.4 605,595 - QEN71_RS02695 0.77 +1.2 605,595 - QEN71_RS02695 0.77 -0.3 605,612 + QEN71_RS02695 0.80 -0.1 605,613 - QEN71_RS02695 0.80 +0.1 605,613 - QEN71_RS02695 0.80 -1.2 605,624 + QEN71_RS02695 0.82 +0.2 605,624 + QEN71_RS02695 0.82 -1.8 605,624 + QEN71_RS02695 0.82 -0.1 605,624 + QEN71_RS02695 0.82 +1.4 605,624 + QEN71_RS02695 0.82 -0.7 605,625 - QEN71_RS02695 0.82 +0.4 605,625 - QEN71_RS02695 0.82 +0.0 605,625 - QEN71_RS02695 0.82 +0.4 605,625 - QEN71_RS02695 0.82 +0.6 605,625 - QEN71_RS02695 0.82 -1.3 605,625 - QEN71_RS02695 0.82 -0.2 605,651 + QEN71_RS02695 0.87 -1.1 605,651 + QEN71_RS02695 0.87 +0.1 605,651 + QEN71_RS02695 0.87 -0.2 605,651 + QEN71_RS02695 0.87 +1.4 605,651 + QEN71_RS02695 0.87 -0.1 605,651 + QEN71_RS02695 0.87 -0.2 605,725 + +0.7 605,725 + +0.3 605,725 + +0.6 605,725 + +2.4 605,725 + +0.2 605,725 + -0.6 605,725 + -1.0 605,725 + -0.1 605,725 + -0.2 605,725 + +0.3 605,725 + -0.3 605,725 + -0.4 605,725 + -1.0 605,725 + -0.2 605,725 + -0.8 605,726 - -0.4 605,726 - -0.3 605,726 - -0.1 605,726 - +0.8 605,726 - -0.9 605,726 - +1.1 605,726 - +0.1 605,726 - +0.8 605,726 - +0.2 605,726 - -0.2 605,726 - -0.0 605,726 - +0.5 605,726 - -0.0 605,726 - +0.6 605,787 + -1.9 606,009 + QEN71_RS02700 0.21 +0.4 606,010 - QEN71_RS02700 0.21 -0.7 606,010 - QEN71_RS02700 0.21 -0.5 606,010 - QEN71_RS02700 0.21 -1.0 606,010 - QEN71_RS02700 0.21 +0.9 606,010 - QEN71_RS02700 0.21 +0.3 606,031 - QEN71_RS02700 0.23 -0.1 606,031 - QEN71_RS02700 0.23 +0.1 606,031 - QEN71_RS02700 0.23 -0.6 606,031 - QEN71_RS02700 0.23 +0.8 606,153 + QEN71_RS02700 0.34 +0.0 606,154 - QEN71_RS02700 0.34 +1.7 606,228 + QEN71_RS02700 0.41 +0.9 606,229 - QEN71_RS02700 0.41 -0.0 606,229 - QEN71_RS02700 0.41 -1.0 606,229 - QEN71_RS02700 0.41 -0.4 606,229 - QEN71_RS02700 0.41 +1.4 606,528 + QEN71_RS02700 0.69 +0.2 606,529 - QEN71_RS02700 0.69 +0.3 606,538 - QEN71_RS02700 0.69 -0.1 606,538 - QEN71_RS02700 0.69 +2.2 606,538 - QEN71_RS02700 0.69 -0.6 606,538 - QEN71_RS02700 0.69 +0.5 606,538 - QEN71_RS02700 0.69 -1.2 606,561 + QEN71_RS02700 0.72 -1.1 606,561 + QEN71_RS02700 0.72 -0.2 606,562 - QEN71_RS02700 0.72 +0.0 606,562 - QEN71_RS02700 0.72 -0.9 606,648 + QEN71_RS02700 0.80 -0.5 606,649 - QEN71_RS02700 0.80 -0.9 606,649 - QEN71_RS02700 0.80 +2.2 606,660 + QEN71_RS02700 0.81 +1.8 606,700 + QEN71_RS02700 0.84 -0.5 606,700 + QEN71_RS02700 0.84 -0.2 606,700 + QEN71_RS02700 0.84 +0.1 606,701 - QEN71_RS02700 0.84 +0.1
Or see this region's nucleotide sequence