Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS01740 and QEN71_RS01745 are separated by 148 nucleotides QEN71_RS01745 and QEN71_RS01750 are separated by 293 nucleotides QEN71_RS01750 and QEN71_RS01755 are separated by 174 nucleotides
QEN71_RS01740: QEN71_RS01740 - HPr(Ser) kinase/phosphatase, at 380,825 to 381,793
_RS01740
QEN71_RS01745: QEN71_RS01745 - PTS sugar transporter subunit IIA, at 381,942 to 382,457
_RS01745
QEN71_RS01750: QEN71_RS01750 - ribosome-associated translation inhibitor RaiA, at 382,751 to 383,110
_RS01750
QEN71_RS01755: QEN71_RS01755 - RNA polymerase factor sigma-54, at 383,285 to 384,802
_RS01755
Position (kb) 381
382
383 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.817 kb on + strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.818 kb on - strand at 381.828 kb on - strand at 381.828 kb on - strand at 381.863 kb on - strand at 381.904 kb on + strand at 381.904 kb on + strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.905 kb on - strand at 381.938 kb on + strand at 381.939 kb on - strand at 381.939 kb on - strand at 381.939 kb on - strand at 381.939 kb on - strand at 382.191 kb on - strand, within QEN71_RS01745 at 382.323 kb on + strand, within QEN71_RS01745 at 382.324 kb on - strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.378 kb on + strand, within QEN71_RS01745 at 382.379 kb on - strand, within QEN71_RS01745 at 382.379 kb on - strand, within QEN71_RS01745 at 382.379 kb on - strand, within QEN71_RS01745 at 382.379 kb on - strand, within QEN71_RS01745 at 382.379 kb on - strand, within QEN71_RS01745 at 382.566 kb on - strand at 382.574 kb on + strand at 382.574 kb on + strand at 382.574 kb on + strand at 382.574 kb on + strand at 382.575 kb on - strand at 382.575 kb on - strand at 382.575 kb on - strand at 382.575 kb on - strand at 382.575 kb on - strand at 382.577 kb on + strand at 382.578 kb on - strand at 382.578 kb on - strand at 382.579 kb on + strand at 382.579 kb on + strand at 382.579 kb on + strand at 382.579 kb on + strand at 382.579 kb on + strand at 382.579 kb on + strand at 382.579 kb on + strand at 382.580 kb on - strand at 382.580 kb on - strand at 382.580 kb on - strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.597 kb on + strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.598 kb on - strand at 382.681 kb on + strand at 382.681 kb on + strand at 382.681 kb on + strand at 382.682 kb on - strand at 382.682 kb on - strand at 382.682 kb on - strand at 382.682 kb on - strand at 382.682 kb on - strand at 382.682 kb on - strand at 382.682 kb on - strand at 382.729 kb on + strand at 382.752 kb on + strand at 382.752 kb on + strand at 382.753 kb on - strand at 382.753 kb on - strand at 382.753 kb on - strand at 382.753 kb on - strand at 382.791 kb on + strand, within QEN71_RS01750 at 382.791 kb on + strand, within QEN71_RS01750 at 382.791 kb on + strand, within QEN71_RS01750 at 382.791 kb on + strand, within QEN71_RS01750 at 382.791 kb on + strand, within QEN71_RS01750 at 382.791 kb on + strand, within QEN71_RS01750 at 382.791 kb on + strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.792 kb on - strand, within QEN71_RS01750 at 382.884 kb on + strand, within QEN71_RS01750 at 382.884 kb on + strand, within QEN71_RS01750 at 382.884 kb on + strand, within QEN71_RS01750 at 382.885 kb on - strand, within QEN71_RS01750 at 382.915 kb on + strand, within QEN71_RS01750 at 382.915 kb on + strand, within QEN71_RS01750 at 382.916 kb on - strand, within QEN71_RS01750 at 382.916 kb on - strand, within QEN71_RS01750 at 382.916 kb on - strand, within QEN71_RS01750 at 382.916 kb on - strand, within QEN71_RS01750 at 383.027 kb on + strand, within QEN71_RS01750 at 383.027 kb on + strand, within QEN71_RS01750 at 383.027 kb on + strand, within QEN71_RS01750 at 383.027 kb on + strand, within QEN71_RS01750 at 383.027 kb on + strand, within QEN71_RS01750 at 383.027 kb on + strand, within QEN71_RS01750 at 383.027 kb on + strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.028 kb on - strand, within QEN71_RS01750 at 383.039 kb on + strand, within QEN71_RS01750 at 383.039 kb on + strand, within QEN71_RS01750 at 383.039 kb on + strand, within QEN71_RS01750 at 383.039 kb on + strand, within QEN71_RS01750 at 383.040 kb on - strand, within QEN71_RS01750 at 383.040 kb on - strand, within QEN71_RS01750 at 383.040 kb on - strand, within QEN71_RS01750 at 383.040 kb on - strand, within QEN71_RS01750 at 383.040 kb on - strand, within QEN71_RS01750 at 383.040 kb on - strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.055 kb on + strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.056 kb on - strand, within QEN71_RS01750 at 383.075 kb on + strand at 383.075 kb on + strand at 383.075 kb on + strand at 383.075 kb on + strand at 383.075 kb on + strand at 383.076 kb on - strand at 383.110 kb on + strand at 383.110 kb on + strand at 383.110 kb on + strand at 383.110 kb on + strand at 383.110 kb on + strand at 383.111 kb on - strand at 383.111 kb on - strand at 383.111 kb on - strand at 383.111 kb on - strand at 383.111 kb on - strand at 383.126 kb on + strand at 383.126 kb on + strand at 383.126 kb on + strand at 383.126 kb on + strand at 383.126 kb on + strand at 383.126 kb on + strand at 383.126 kb on + strand at 383.126 kb on + strand at 383.126 kb on + strand at 383.127 kb on - strand at 383.127 kb on - strand at 383.127 kb on - strand at 383.206 kb on + strand at 383.207 kb on - strand at 383.207 kb on - strand at 383.287 kb on - strand at 383.347 kb on + strand at 383.348 kb on - strand at 383.348 kb on - strand at 383.348 kb on - strand at 383.348 kb on - strand at 383.432 kb on + strand at 383.432 kb on + strand at 383.433 kb on - strand at 383.433 kb on - strand at 383.433 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 381,817 + +1.4 381,817 + +0.3 381,817 + -1.2 381,817 + -0.2 381,817 + +0.7 381,817 + +1.2 381,817 + -0.5 381,817 + +0.2 381,817 + -0.8 381,817 + +1.3 381,817 + +2.2 381,818 - -0.2 381,818 - +0.5 381,818 - +0.2 381,818 - +0.2 381,818 - -1.1 381,818 - +0.1 381,818 - -0.8 381,818 - -0.6 381,818 - -1.3 381,818 - -0.5 381,818 - +0.1 381,818 - -0.6 381,818 - +0.3 381,818 - -0.4 381,818 - +0.2 381,818 - -0.3 381,818 - -1.5 381,818 - +0.0 381,828 - +0.1 381,828 - -0.7 381,863 - -1.0 381,904 + -0.2 381,904 + -0.8 381,905 - +0.2 381,905 - -2.3 381,905 - -0.3 381,905 - -0.2 381,905 - +0.4 381,905 - -2.2 381,905 - +0.5 381,905 - +1.3 381,905 - +0.7 381,905 - +0.1 381,905 - -0.3 381,938 + -1.1 381,939 - +0.1 381,939 - -0.2 381,939 - -1.6 381,939 - +0.0 382,191 - QEN71_RS01745 0.48 -3.3 382,323 + QEN71_RS01745 0.74 -2.4 382,324 - QEN71_RS01745 0.74 -1.2 382,378 + QEN71_RS01745 0.84 -0.8 382,378 + QEN71_RS01745 0.84 -2.2 382,378 + QEN71_RS01745 0.84 +0.2 382,378 + QEN71_RS01745 0.84 -1.0 382,378 + QEN71_RS01745 0.84 -0.8 382,378 + QEN71_RS01745 0.84 -1.2 382,378 + QEN71_RS01745 0.84 -2.1 382,378 + QEN71_RS01745 0.84 -2.3 382,378 + QEN71_RS01745 0.84 +0.1 382,378 + QEN71_RS01745 0.84 -3.0 382,379 - QEN71_RS01745 0.85 -2.4 382,379 - QEN71_RS01745 0.85 -2.6 382,379 - QEN71_RS01745 0.85 -2.3 382,379 - QEN71_RS01745 0.85 -2.0 382,379 - QEN71_RS01745 0.85 +0.1 382,566 - -1.6 382,574 + -0.8 382,574 + -1.2 382,574 + +0.4 382,574 + -1.0 382,575 - +0.0 382,575 - -1.7 382,575 - -0.8 382,575 - -1.0 382,575 - -0.0 382,577 + -0.3 382,578 - +0.1 382,578 - -0.4 382,579 + -0.0 382,579 + -0.3 382,579 + +0.3 382,579 + +0.4 382,579 + +0.8 382,579 + -0.2 382,579 + -0.1 382,580 - -0.1 382,580 - +0.0 382,580 - +1.2 382,597 + -0.8 382,597 + -0.5 382,597 + -2.1 382,597 + -1.0 382,597 + -1.3 382,597 + -1.1 382,597 + -1.1 382,597 + -1.5 382,597 + -0.5 382,597 + -0.9 382,598 - -0.4 382,598 - +1.4 382,598 - -0.2 382,598 - -0.0 382,598 - +0.4 382,598 - -0.5 382,598 - +0.7 382,598 - -0.7 382,598 - +0.4 382,598 - -0.9 382,598 - -0.0 382,598 - +0.4 382,598 - +1.6 382,598 - +1.5 382,681 + -0.5 382,681 + -0.2 382,681 + -0.8 382,682 - -0.9 382,682 - +0.4 382,682 - +1.5 382,682 - -0.3 382,682 - +0.2 382,682 - -0.3 382,682 - -0.5 382,729 + -0.3 382,752 + -0.0 382,752 + +0.0 382,753 - +0.5 382,753 - -1.1 382,753 - +0.1 382,753 - -1.9 382,791 + QEN71_RS01750 0.11 +0.5 382,791 + QEN71_RS01750 0.11 +0.6 382,791 + QEN71_RS01750 0.11 -0.3 382,791 + QEN71_RS01750 0.11 -0.6 382,791 + QEN71_RS01750 0.11 -1.3 382,791 + QEN71_RS01750 0.11 -0.9 382,791 + QEN71_RS01750 0.11 +0.7 382,792 - QEN71_RS01750 0.11 -1.0 382,792 - QEN71_RS01750 0.11 -0.2 382,792 - QEN71_RS01750 0.11 +0.2 382,792 - QEN71_RS01750 0.11 -0.1 382,792 - QEN71_RS01750 0.11 -0.4 382,792 - QEN71_RS01750 0.11 -0.1 382,792 - QEN71_RS01750 0.11 -0.3 382,792 - QEN71_RS01750 0.11 +0.1 382,792 - QEN71_RS01750 0.11 -0.7 382,792 - QEN71_RS01750 0.11 -0.1 382,884 + QEN71_RS01750 0.37 -0.2 382,884 + QEN71_RS01750 0.37 +0.4 382,884 + QEN71_RS01750 0.37 +0.1 382,885 - QEN71_RS01750 0.37 -2.6 382,915 + QEN71_RS01750 0.46 -0.9 382,915 + QEN71_RS01750 0.46 +0.1 382,916 - QEN71_RS01750 0.46 -1.5 382,916 - QEN71_RS01750 0.46 +0.3 382,916 - QEN71_RS01750 0.46 -1.2 382,916 - QEN71_RS01750 0.46 -0.3 383,027 + QEN71_RS01750 0.77 -1.3 383,027 + QEN71_RS01750 0.77 -0.1 383,027 + QEN71_RS01750 0.77 -1.3 383,027 + QEN71_RS01750 0.77 +0.3 383,027 + QEN71_RS01750 0.77 -0.4 383,027 + QEN71_RS01750 0.77 +1.1 383,027 + QEN71_RS01750 0.77 +0.2 383,028 - QEN71_RS01750 0.77 -1.2 383,028 - QEN71_RS01750 0.77 +0.6 383,028 - QEN71_RS01750 0.77 +0.6 383,028 - QEN71_RS01750 0.77 +0.8 383,028 - QEN71_RS01750 0.77 -0.7 383,028 - QEN71_RS01750 0.77 -1.1 383,028 - QEN71_RS01750 0.77 -0.2 383,028 - QEN71_RS01750 0.77 +0.1 383,028 - QEN71_RS01750 0.77 -0.3 383,028 - QEN71_RS01750 0.77 -0.9 383,039 + QEN71_RS01750 0.80 -0.4 383,039 + QEN71_RS01750 0.80 -0.5 383,039 + QEN71_RS01750 0.80 -1.3 383,039 + QEN71_RS01750 0.80 -0.2 383,040 - QEN71_RS01750 0.80 -1.5 383,040 - QEN71_RS01750 0.80 -0.7 383,040 - QEN71_RS01750 0.80 +1.0 383,040 - QEN71_RS01750 0.80 +0.2 383,040 - QEN71_RS01750 0.80 -0.2 383,040 - QEN71_RS01750 0.80 -1.2 383,055 + QEN71_RS01750 0.84 +0.0 383,055 + QEN71_RS01750 0.84 +1.4 383,055 + QEN71_RS01750 0.84 -0.5 383,055 + QEN71_RS01750 0.84 +0.2 383,055 + QEN71_RS01750 0.84 -1.3 383,055 + QEN71_RS01750 0.84 +1.0 383,055 + QEN71_RS01750 0.84 +0.7 383,055 + QEN71_RS01750 0.84 +0.8 383,055 + QEN71_RS01750 0.84 +0.8 383,055 + QEN71_RS01750 0.84 -0.8 383,055 + QEN71_RS01750 0.84 +1.3 383,055 + QEN71_RS01750 0.84 -0.8 383,055 + QEN71_RS01750 0.84 +0.8 383,056 - QEN71_RS01750 0.85 -0.8 383,056 - QEN71_RS01750 0.85 -0.1 383,056 - QEN71_RS01750 0.85 -0.4 383,056 - QEN71_RS01750 0.85 -0.8 383,056 - QEN71_RS01750 0.85 +0.5 383,056 - QEN71_RS01750 0.85 -0.5 383,056 - QEN71_RS01750 0.85 -0.2 383,056 - QEN71_RS01750 0.85 -0.6 383,056 - QEN71_RS01750 0.85 +0.5 383,056 - QEN71_RS01750 0.85 +0.1 383,056 - QEN71_RS01750 0.85 -0.2 383,075 + -0.1 383,075 + -0.4 383,075 + -0.0 383,075 + -0.4 383,075 + +0.2 383,076 - -0.4 383,110 + -0.0 383,110 + -0.4 383,110 + +0.4 383,110 + +0.8 383,110 + +0.5 383,111 - +0.7 383,111 - +0.8 383,111 - +0.5 383,111 - +0.0 383,111 - -0.5 383,126 + +0.1 383,126 + -0.1 383,126 + +0.7 383,126 + -0.0 383,126 + -0.2 383,126 + -0.4 383,126 + -0.1 383,126 + +1.1 383,126 + -0.8 383,127 - +0.0 383,127 - +0.1 383,127 - -2.0 383,206 + -0.1 383,207 - +0.4 383,207 - -0.4 383,287 - -0.3 383,347 + +1.3 383,348 - -0.8 383,348 - -0.8 383,348 - -0.3 383,348 - -0.8 383,432 + -0.5 383,432 + -1.2 383,433 - -0.2 383,433 - +0.1 383,433 - -0.0
Or see this region's nucleotide sequence