Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS32780 and QEN71_RS32785 are separated by 626 nucleotides QEN71_RS32785 and QEN71_RS32790 overlap by 22 nucleotides QEN71_RS32790 and QEN71_RS32795 are separated by 18 nucleotides
QEN71_RS32780: QEN71_RS32780 - phosphoribulokinase, at 685,984 to 686,856
_RS32780
QEN71_RS32785: QEN71_RS32785 - DUF6513 domain-containing protein, at 687,483 to 688,862
_RS32785
QEN71_RS32790: QEN71_RS32790 - flavoprotein, at 688,841 to 689,440
_RS32790
QEN71_RS32795: QEN71_RS32795 - sigma-54-dependent Fis family transcriptional regulator, at 689,459 to 691,564
_RS32795
Position (kb) 687
688
689 Strain fitness (log2 ratio) -2
-1
0
1 at 686.623 kb on - strand, within QEN71_RS32780 at 686.676 kb on - strand, within QEN71_RS32780 at 686.724 kb on + strand, within QEN71_RS32780 at 686.763 kb on + strand, within QEN71_RS32780 at 686.764 kb on - strand, within QEN71_RS32780 at 686.796 kb on + strand at 686.817 kb on + strand at 686.909 kb on - strand at 687.042 kb on - strand at 687.497 kb on + strand at 687.497 kb on + strand at 687.634 kb on + strand, within QEN71_RS32785 at 687.634 kb on + strand, within QEN71_RS32785 at 687.635 kb on - strand, within QEN71_RS32785 at 687.676 kb on + strand, within QEN71_RS32785 at 688.020 kb on - strand, within QEN71_RS32785 at 688.099 kb on + strand, within QEN71_RS32785 at 688.099 kb on + strand, within QEN71_RS32785 at 688.484 kb on + strand, within QEN71_RS32785 at 688.484 kb on + strand, within QEN71_RS32785 at 688.484 kb on + strand, within QEN71_RS32785 at 688.484 kb on + strand, within QEN71_RS32785 at 688.485 kb on - strand, within QEN71_RS32785 at 689.086 kb on - strand, within QEN71_RS32790 at 689.105 kb on - strand, within QEN71_RS32790 at 689.137 kb on + strand, within QEN71_RS32790 at 689.138 kb on - strand, within QEN71_RS32790 at 689.172 kb on + strand, within QEN71_RS32790 at 689.173 kb on - strand, within QEN71_RS32790 at 689.173 kb on - strand, within QEN71_RS32790 at 689.173 kb on - strand, within QEN71_RS32790 at 689.173 kb on - strand, within QEN71_RS32790 at 689.268 kb on + strand, within QEN71_RS32790 at 689.269 kb on - strand, within QEN71_RS32790 at 689.449 kb on + strand at 689.450 kb on - strand at 689.450 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 686,623 - QEN71_RS32780 0.73 -0.2 686,676 - QEN71_RS32780 0.79 -1.0 686,724 + QEN71_RS32780 0.85 +0.2 686,763 + QEN71_RS32780 0.89 +1.1 686,764 - QEN71_RS32780 0.89 -0.6 686,796 + -0.7 686,817 + +1.1 686,909 - -0.1 687,042 - +0.1 687,497 + -0.2 687,497 + +0.5 687,634 + QEN71_RS32785 0.11 -1.9 687,634 + QEN71_RS32785 0.11 -0.6 687,635 - QEN71_RS32785 0.11 -1.4 687,676 + QEN71_RS32785 0.14 +0.3 688,020 - QEN71_RS32785 0.39 -1.2 688,099 + QEN71_RS32785 0.45 +0.1 688,099 + QEN71_RS32785 0.45 -0.4 688,484 + QEN71_RS32785 0.73 -0.3 688,484 + QEN71_RS32785 0.73 +0.1 688,484 + QEN71_RS32785 0.73 +1.3 688,484 + QEN71_RS32785 0.73 +0.2 688,485 - QEN71_RS32785 0.73 -0.7 689,086 - QEN71_RS32790 0.41 +1.0 689,105 - QEN71_RS32790 0.44 -0.1 689,137 + QEN71_RS32790 0.49 -0.4 689,138 - QEN71_RS32790 0.49 -0.7 689,172 + QEN71_RS32790 0.55 +0.0 689,173 - QEN71_RS32790 0.55 +0.0 689,173 - QEN71_RS32790 0.55 -0.4 689,173 - QEN71_RS32790 0.55 +0.1 689,173 - QEN71_RS32790 0.55 -0.4 689,268 + QEN71_RS32790 0.71 -1.6 689,269 - QEN71_RS32790 0.71 +1.0 689,449 + -0.1 689,450 - +0.8 689,450 - -0.2
Or see this region's nucleotide sequence