Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS30720 and QEN71_RS30725 are separated by 222 nucleotides QEN71_RS30725 and QEN71_RS30730 are separated by 68 nucleotides QEN71_RS30730 and QEN71_RS30735 are separated by 316 nucleotides
QEN71_RS30720: QEN71_RS30720 - hybrid sensor histidine kinase/response regulator, at 232,430 to 234,604
_RS30720
QEN71_RS30725: QEN71_RS30725 - MFS transporter, at 234,827 to 236,083
_RS30725
QEN71_RS30730: QEN71_RS30730 - hypothetical protein, at 236,152 to 236,439
_RS30730
QEN71_RS30735: QEN71_RS30735 - TonB-dependent siderophore receptor, at 236,756 to 238,900
_RS30735
Position (kb) 234
235
236
237 Strain fitness (log2 ratio) -2
-1
0
1
2 at 233.922 kb on + strand, within QEN71_RS30720 at 233.922 kb on + strand, within QEN71_RS30720 at 233.923 kb on - strand, within QEN71_RS30720 at 233.968 kb on - strand, within QEN71_RS30720 at 233.968 kb on - strand, within QEN71_RS30720 at 233.982 kb on + strand, within QEN71_RS30720 at 234.099 kb on + strand, within QEN71_RS30720 at 234.099 kb on + strand, within QEN71_RS30720 at 234.100 kb on - strand, within QEN71_RS30720 at 234.100 kb on - strand, within QEN71_RS30720 at 234.100 kb on - strand, within QEN71_RS30720 at 234.423 kb on + strand at 234.423 kb on + strand at 234.424 kb on - strand at 234.435 kb on + strand at 234.435 kb on + strand at 234.435 kb on + strand at 234.435 kb on + strand at 234.435 kb on + strand at 234.435 kb on + strand at 234.435 kb on + strand at 234.435 kb on + strand at 234.441 kb on + strand at 234.441 kb on + strand at 234.441 kb on + strand at 234.442 kb on - strand at 234.442 kb on - strand at 234.444 kb on + strand at 234.444 kb on + strand at 234.445 kb on - strand at 234.575 kb on + strand at 234.575 kb on + strand at 234.575 kb on + strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.576 kb on - strand at 234.592 kb on + strand at 234.621 kb on + strand at 234.622 kb on - strand at 234.634 kb on - strand at 234.728 kb on + strand at 234.728 kb on + strand at 234.728 kb on + strand at 234.728 kb on + strand at 234.728 kb on + strand at 234.728 kb on + strand at 234.728 kb on + strand at 234.729 kb on - strand at 234.729 kb on - strand at 234.729 kb on - strand at 234.729 kb on - strand at 234.729 kb on - strand at 234.729 kb on - strand at 234.729 kb on - strand at 234.805 kb on + strand at 234.805 kb on + strand at 234.805 kb on + strand at 234.805 kb on + strand at 234.805 kb on + strand at 234.805 kb on + strand at 234.805 kb on + strand at 234.806 kb on - strand at 234.806 kb on - strand at 234.806 kb on - strand at 234.806 kb on - strand at 234.806 kb on - strand at 234.940 kb on - strand at 235.331 kb on + strand, within QEN71_RS30725 at 235.331 kb on + strand, within QEN71_RS30725 at 235.331 kb on + strand, within QEN71_RS30725 at 235.331 kb on + strand, within QEN71_RS30725 at 235.343 kb on + strand, within QEN71_RS30725 at 235.343 kb on + strand, within QEN71_RS30725 at 235.343 kb on + strand, within QEN71_RS30725 at 235.343 kb on + strand, within QEN71_RS30725 at 235.343 kb on + strand, within QEN71_RS30725 at 235.343 kb on + strand, within QEN71_RS30725 at 235.343 kb on + strand, within QEN71_RS30725 at 235.344 kb on - strand, within QEN71_RS30725 at 235.344 kb on - strand, within QEN71_RS30725 at 235.665 kb on + strand, within QEN71_RS30725 at 235.980 kb on - strand at 235.980 kb on - strand at 236.081 kb on + strand at 236.418 kb on - strand at 236.418 kb on - strand at 236.456 kb on + strand at 236.457 kb on - strand at 236.469 kb on + strand at 236.478 kb on + strand at 236.479 kb on - strand at 236.480 kb on + strand at 236.555 kb on + strand at 236.556 kb on - strand at 236.556 kb on - strand at 236.634 kb on + strand at 236.634 kb on + strand at 236.634 kb on + strand at 236.689 kb on + strand at 236.689 kb on + strand at 236.752 kb on + strand at 236.752 kb on + strand at 236.752 kb on + strand at 236.753 kb on - strand at 236.918 kb on + strand at 236.918 kb on + strand at 236.919 kb on - strand at 236.919 kb on - strand at 236.919 kb on - strand at 237.050 kb on + strand, within QEN71_RS30735 at 237.050 kb on + strand, within QEN71_RS30735 at 237.050 kb on + strand, within QEN71_RS30735 at 237.050 kb on + strand, within QEN71_RS30735
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 233,922 + QEN71_RS30720 0.69 -0.9 233,922 + QEN71_RS30720 0.69 -1.5 233,923 - QEN71_RS30720 0.69 -0.9 233,968 - QEN71_RS30720 0.71 -0.7 233,968 - QEN71_RS30720 0.71 +0.7 233,982 + QEN71_RS30720 0.71 +0.3 234,099 + QEN71_RS30720 0.77 +0.3 234,099 + QEN71_RS30720 0.77 +0.1 234,100 - QEN71_RS30720 0.77 -1.1 234,100 - QEN71_RS30720 0.77 +0.4 234,100 - QEN71_RS30720 0.77 -0.7 234,423 + -1.5 234,423 + +1.7 234,424 - +2.1 234,435 + -0.9 234,435 + -0.4 234,435 + -1.4 234,435 + -1.1 234,435 + -0.0 234,435 + -0.1 234,435 + -0.1 234,435 + -0.2 234,441 + -1.5 234,441 + -0.5 234,441 + +0.1 234,442 - +1.4 234,442 - -0.7 234,444 + +0.1 234,444 + -0.1 234,445 - -0.1 234,575 + +0.4 234,575 + -0.5 234,575 + -0.2 234,576 - +1.0 234,576 - -1.5 234,576 - -0.2 234,576 - -0.7 234,576 - -1.2 234,576 - -0.7 234,576 - -0.5 234,576 - -0.2 234,576 - -0.1 234,576 - -1.8 234,576 - +0.0 234,576 - +0.5 234,576 - +0.3 234,576 - +0.3 234,592 + -2.0 234,621 + -1.1 234,622 - +1.3 234,634 - -2.1 234,728 + -1.1 234,728 + +0.3 234,728 + +0.0 234,728 + -0.1 234,728 + +1.6 234,728 + +0.6 234,728 + +1.1 234,729 - -1.2 234,729 - -0.7 234,729 - -0.6 234,729 - -0.5 234,729 - +0.3 234,729 - -1.3 234,729 - -0.2 234,805 + -1.2 234,805 + +1.2 234,805 + -0.2 234,805 + -0.4 234,805 + -0.4 234,805 + -1.4 234,805 + +0.3 234,806 - -0.9 234,806 - -1.5 234,806 - -0.9 234,806 - -0.4 234,806 - -0.7 234,940 - +1.0 235,331 + QEN71_RS30725 0.40 -0.8 235,331 + QEN71_RS30725 0.40 +0.6 235,331 + QEN71_RS30725 0.40 +0.3 235,331 + QEN71_RS30725 0.40 -0.5 235,343 + QEN71_RS30725 0.41 -0.3 235,343 + QEN71_RS30725 0.41 -0.2 235,343 + QEN71_RS30725 0.41 -0.0 235,343 + QEN71_RS30725 0.41 +0.1 235,343 + QEN71_RS30725 0.41 -0.0 235,343 + QEN71_RS30725 0.41 +0.9 235,343 + QEN71_RS30725 0.41 -0.5 235,344 - QEN71_RS30725 0.41 -0.4 235,344 - QEN71_RS30725 0.41 -0.1 235,665 + QEN71_RS30725 0.67 +0.2 235,980 - -0.2 235,980 - +2.1 236,081 + -2.1 236,418 - -0.9 236,418 - +0.4 236,456 + -2.4 236,457 - +1.5 236,469 + -1.6 236,478 + +0.5 236,479 - -0.1 236,480 + +0.5 236,555 + -0.2 236,556 - +0.8 236,556 - -1.1 236,634 + +0.5 236,634 + +0.2 236,634 + -1.6 236,689 + +1.1 236,689 + -0.8 236,752 + -0.9 236,752 + -1.5 236,752 + +0.1 236,753 - +0.3 236,918 + -0.3 236,918 + -0.6 236,919 - +0.5 236,919 - -0.8 236,919 - +0.8 237,050 + QEN71_RS30735 0.14 -0.6 237,050 + QEN71_RS30735 0.14 +0.0 237,050 + QEN71_RS30735 0.14 -0.8 237,050 + QEN71_RS30735 0.14 +0.8
Or see this region's nucleotide sequence