Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS28115 and QEN71_RS28120 are separated by 126 nucleotides QEN71_RS28120 and QEN71_RS28125 overlap by 8 nucleotides QEN71_RS28125 and QEN71_RS28130 are separated by 156 nucleotides
QEN71_RS28115: QEN71_RS28115 - porphobilinogen synthase, at 6,253,112 to 6,254,110
_RS28115
QEN71_RS28120: QEN71_RS28120 - protein-disulfide reductase DsbD, at 6,254,237 to 6,256,090
_RS28120
QEN71_RS28125: QEN71_RS28125 - divalent-cation tolerance protein CutA, at 6,256,083 to 6,256,409
_RS28125
QEN71_RS28130: QEN71_RS28130 - 50S ribosomal protein L17, at 6,256,566 to 6,256,961
_RS28130
Position (kb)
6254
6255
6256
6257 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6254.149 kb on + strand at 6254.149 kb on + strand at 6254.150 kb on - strand at 6254.150 kb on - strand at 6254.150 kb on - strand at 6254.150 kb on - strand at 6254.150 kb on - strand at 6255.885 kb on + strand, within QEN71_RS28120 at 6256.130 kb on - strand, within QEN71_RS28125 at 6256.177 kb on + strand, within QEN71_RS28125 at 6256.177 kb on + strand, within QEN71_RS28125 at 6256.178 kb on - strand, within QEN71_RS28125 at 6256.178 kb on - strand, within QEN71_RS28125 at 6256.285 kb on + strand, within QEN71_RS28125 at 6256.285 kb on + strand, within QEN71_RS28125 at 6256.286 kb on - strand, within QEN71_RS28125 at 6256.286 kb on - strand, within QEN71_RS28125 at 6256.354 kb on - strand, within QEN71_RS28125 at 6256.354 kb on - strand, within QEN71_RS28125 at 6256.354 kb on - strand, within QEN71_RS28125 at 6256.400 kb on + strand at 6256.400 kb on + strand at 6256.400 kb on + strand at 6256.401 kb on - strand at 6256.401 kb on - strand at 6256.401 kb on - strand at 6256.401 kb on - strand at 6256.401 kb on - strand at 6256.401 kb on - strand at 6256.401 kb on - strand at 6256.401 kb on - strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.456 kb on + strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.457 kb on - strand at 6256.548 kb on + strand at 6256.548 kb on + strand at 6256.549 kb on - strand at 6256.549 kb on - strand at 6256.549 kb on - strand at 6256.549 kb on - strand at 6256.567 kb on + strand at 6256.567 kb on + strand at 6256.567 kb on + strand at 6256.567 kb on + strand at 6256.568 kb on - strand at 6256.568 kb on - strand at 6257.001 kb on - strand at 6257.001 kb on - strand at 6257.001 kb on - strand at 6257.061 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 6,254,149 + -0.5 6,254,149 + +0.5 6,254,150 - -1.2 6,254,150 - +0.1 6,254,150 - -0.4 6,254,150 - +0.3 6,254,150 - +0.2 6,255,885 + QEN71_RS28120 0.89 -0.3 6,256,130 - QEN71_RS28125 0.14 -0.0 6,256,177 + QEN71_RS28125 0.29 -0.5 6,256,177 + QEN71_RS28125 0.29 +0.1 6,256,178 - QEN71_RS28125 0.29 -0.0 6,256,178 - QEN71_RS28125 0.29 -0.6 6,256,285 + QEN71_RS28125 0.62 -2.7 6,256,285 + QEN71_RS28125 0.62 -0.1 6,256,286 - QEN71_RS28125 0.62 +0.8 6,256,286 - QEN71_RS28125 0.62 +0.1 6,256,354 - QEN71_RS28125 0.83 -1.0 6,256,354 - QEN71_RS28125 0.83 +0.7 6,256,354 - QEN71_RS28125 0.83 +0.3 6,256,400 + -1.4 6,256,400 + -2.4 6,256,400 + -2.9 6,256,401 - +0.3 6,256,401 - -1.4 6,256,401 - +0.0 6,256,401 - +0.5 6,256,401 - +1.3 6,256,401 - -2.1 6,256,401 - +0.1 6,256,401 - -0.1 6,256,456 + -0.3 6,256,456 + +1.6 6,256,456 + -1.0 6,256,456 + -0.4 6,256,456 + -0.4 6,256,456 + +2.3 6,256,456 + -0.9 6,256,456 + +0.3 6,256,456 + +2.3 6,256,456 + -0.6 6,256,456 + +0.7 6,256,456 + -0.7 6,256,456 + -2.2 6,256,456 + -0.0 6,256,456 + +0.2 6,256,457 - +0.3 6,256,457 - +0.9 6,256,457 - +0.1 6,256,457 - +0.7 6,256,457 - +1.1 6,256,457 - +1.4 6,256,457 - -0.7 6,256,457 - -0.7 6,256,457 - +0.1 6,256,457 - -0.4 6,256,457 - -0.9 6,256,457 - -0.4 6,256,457 - -0.3 6,256,457 - -0.7 6,256,457 - +0.1 6,256,457 - -0.8 6,256,457 - -1.9 6,256,457 - -0.0 6,256,548 + +1.1 6,256,548 + +0.9 6,256,549 - -1.6 6,256,549 - -0.3 6,256,549 - -1.4 6,256,549 - -1.1 6,256,567 + -1.0 6,256,567 + -0.5 6,256,567 + +0.1 6,256,567 + +2.0 6,256,568 - -0.6 6,256,568 - -0.0 6,257,001 - -0.2 6,257,001 - +0.5 6,257,001 - +0.5 6,257,061 - -0.1
Or see this region's nucleotide sequence