Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03693
Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4 |
---|---|---|---|---|---|
remove | |||||
4,123,612 | + | MIT1002_03692 | 0.24 | -0.9 | |
4,123,612 | + | MIT1002_03692 | 0.24 | -0.3 | |
4,123,612 | + | MIT1002_03692 | 0.24 | -2.0 | |
4,123,612 | + | MIT1002_03692 | 0.24 | -2.4 | |
4,123,612 | + | MIT1002_03692 | 0.24 | -1.7 | |
4,123,720 | + | MIT1002_03692 | 0.32 | -0.3 | |
4,123,745 | + | MIT1002_03692 | 0.34 | -3.6 | |
4,123,923 | + | MIT1002_03692 | 0.48 | -0.8 | |
4,124,004 | + | MIT1002_03692 | 0.54 | -0.7 | |
4,124,110 | + | MIT1002_03692 | 0.62 | -1.5 | |
4,124,171 | + | MIT1002_03692 | 0.67 | -1.9 | |
4,124,265 | + | MIT1002_03692 | 0.74 | -1.4 | |
4,124,297 | - | MIT1002_03692 | 0.76 | -1.3 | |
4,124,310 | + | MIT1002_03692 | 0.77 | -0.4 | |
4,124,395 | + | MIT1002_03692 | 0.84 | -1.0 | |
4,124,411 | + | MIT1002_03692 | 0.85 | -4.0 | |
4,124,516 | + | -0.3 | |||
4,124,586 | - | -0.2 | |||
4,124,598 | + | -2.7 | |||
4,125,076 | - | -1.5 |
Or see this region's nucleotide sequence