Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03682

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
4,113,746	-		MIT1002_03680	0.76	-1.4
4,113,783	+		MIT1002_03680	0.80	+0.3
4,113,783	+		MIT1002_03680	0.80	-1.3
4,113,792	-		MIT1002_03680	0.80	-1.0
4,113,793	+		MIT1002_03680	0.81	+1.7
4,113,801	-		MIT1002_03680	0.81	-0.1
4,113,801	-		MIT1002_03680	0.81	-1.2
4,113,801	-		MIT1002_03680	0.81	+0.5
4,113,811	-		MIT1002_03680	0.82	+0.3
4,113,811	-		MIT1002_03680	0.82	-0.4
4,113,811	-		MIT1002_03680	0.82	-1.6
4,113,864	-		MIT1002_03680	0.88	+0.1
4,113,926	-				+0.3
4,113,989	+				-0.3
4,114,049	+				+0.3
4,114,240	-		MIT1002_03681	0.36	+0.9
4,114,272	+		MIT1002_03681	0.41	-0.0
4,114,275	+		MIT1002_03681	0.41	+0.3
4,114,280	-		MIT1002_03681	0.42	-1.1
4,114,282	+		MIT1002_03681	0.42	+0.2
4,114,284	+		MIT1002_03681	0.43	-2.8
4,114,365	+		MIT1002_03681	0.54	-0.7
4,114,365	+		MIT1002_03681	0.54	+0.2
4,114,373	-		MIT1002_03681	0.55	-0.3
4,114,373	-		MIT1002_03681	0.55	+0.3
4,114,373	-		MIT1002_03681	0.55	+0.3
4,114,373	-		MIT1002_03681	0.55	+0.7
4,114,531	-		MIT1002_03681	0.77	-0.3
4,114,535	-		MIT1002_03681	0.78	-1.8
4,114,540	+		MIT1002_03681	0.78	+0.4
4,114,540	+		MIT1002_03681	0.78	-0.1
4,114,548	-		MIT1002_03681	0.80	+0.2
4,114,548	-		MIT1002_03681	0.80	-0.3
4,114,708	+				-0.8
4,116,519	-				-0.1
4,116,551	+				-2.1
4,116,602	+		MIT1002_03683	0.15	-0.8
4,116,642	-		MIT1002_03683	0.21	-1.7
4,116,668	+		MIT1002_03683	0.25	-0.1
4,116,679	+		MIT1002_03683	0.26	-1.1
4,116,694	+		MIT1002_03683	0.28	+0.4
4,116,697	+		MIT1002_03683	0.29	-0.2
4,116,697	+		MIT1002_03683	0.29	-0.1
4,116,699	-		MIT1002_03683	0.29	-1.2
4,116,706	-		MIT1002_03683	0.30	-1.0
4,116,707	-		MIT1002_03683	0.30	-0.1
4,116,723	-		MIT1002_03683	0.33	-1.7
4,116,743	+		MIT1002_03683	0.35	+0.6
4,116,751	-		MIT1002_03683	0.37	-0.3
4,116,751	-		MIT1002_03683	0.37	-0.3
4,116,827	+		MIT1002_03683	0.48	-1.5
4,116,827	-		MIT1002_03683	0.48	-0.5
4,116,835	-		MIT1002_03683	0.49	-0.6
4,116,835	-		MIT1002_03683	0.49	-0.9
4,116,835	-		MIT1002_03683	0.49	-0.6
4,116,835	-		MIT1002_03683	0.49	-1.9
4,116,855	+		MIT1002_03683	0.52	-0.9
4,116,886	+		MIT1002_03683	0.56	-1.0
4,116,931	+		MIT1002_03683	0.62	+0.0
4,116,946	-		MIT1002_03683	0.65	-1.3
4,117,035	+		MIT1002_03683	0.77	-0.7
4,117,107	-		MIT1002_03683	0.88	-1.3
4,117,199	+				-0.3
4,117,207	-				+1.0
4,117,207	-				+0.3
4,117,223	-				-0.8
4,117,230	+				+0.7
4,117,231	-				+0.2
4,117,232	-				+0.4
4,117,248	+				+0.4
4,117,248	+				-0.5
4,117,376	-				-0.2
4,117,411	+		MIT1002_03684	0.15	+0.4