Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03625

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
4,051,511	+		MIT1002_03624	0.63	+2.3
4,051,511	+		MIT1002_03624	0.63	-1.9
4,051,554	+		MIT1002_03624	0.66	-0.7
4,051,619	-		MIT1002_03624	0.70	-1.6
4,051,623	+		MIT1002_03624	0.70	+1.1
4,051,631	-		MIT1002_03624	0.71	+0.4
4,051,631	-		MIT1002_03624	0.71	+0.1
4,051,645	+		MIT1002_03624	0.71	+0.9
4,051,685	-		MIT1002_03624	0.74	-1.7
4,051,723	-		MIT1002_03624	0.76	-0.7
4,051,740	+		MIT1002_03624	0.77	+0.8
4,051,761	-		MIT1002_03624	0.79	+0.7
4,051,982	-				-0.2
4,051,984	-				-0.5
4,052,013	-				+1.0
4,052,125	+				+0.3
4,052,125	+				-0.1
4,052,125	+				-0.7
4,052,125	+				+0.1
4,052,125	+				+0.8
4,052,125	+				+0.4
4,052,133	-				-0.7
4,052,133	-				+0.4
4,052,133	-				+1.9
4,052,133	-				-0.7
4,052,133	-				-1.9
4,052,144	+				+0.1
4,052,152	-				+0.4
4,052,333	+				-0.7
4,052,362	+				+0.0
4,052,394	-		MIT1002_03625	0.10	-1.0
4,052,435	-		MIT1002_03625	0.19	-1.4
4,052,613	+		MIT1002_03625	0.55	+1.1
4,052,613	+		MIT1002_03625	0.55	-0.5
4,052,618	+		MIT1002_03625	0.57	+0.3
4,052,705	+		MIT1002_03625	0.75	-0.7
4,052,712	+		MIT1002_03625	0.76	-0.3
4,052,713	-		MIT1002_03625	0.76	-0.7
4,052,770	-		MIT1002_03625	0.88	+0.5
4,052,805	-				+0.4
4,052,842	-				-2.7
4,052,914	-				-1.7
4,052,915	+				+1.2
4,052,915	+				+0.3
4,053,027	-		MIT1002_03626	0.18	+0.2
4,053,096	+		MIT1002_03626	0.29	+0.6
4,053,145	+		MIT1002_03626	0.37	+0.2
4,053,201	+		MIT1002_03626	0.45	-0.5
4,053,312	+		MIT1002_03626	0.63	+2.5
4,053,312	+		MIT1002_03626	0.63	-1.7
4,053,320	-		MIT1002_03626	0.64	-1.8
4,053,320	-		MIT1002_03626	0.64	+0.8
4,053,342	-		MIT1002_03626	0.67	+0.2
4,053,477	-		MIT1002_03626	0.88	-0.3
4,053,479	+		MIT1002_03626	0.89	+1.4
4,053,479	+		MIT1002_03626	0.89	+0.9
4,053,525	-				+0.6
4,053,525	-				-0.6
4,053,625	-				+0.2
4,053,635	+				+0.1
4,053,668	-				+2.0
4,053,683	-				-1.0
4,053,685	+				-0.4
4,053,685	+				-0.4
4,053,690	+				+1.7
4,053,693	-				+0.5
4,053,705	+				-2.4
4,053,707	+				+0.5
4,053,712	+				-0.1
4,053,760	-				-0.7
4,053,762	+				-0.4
4,053,762	+				+0.6
4,053,770	-				+1.2
4,053,781	-				+0.3
4,053,807	-				+0.2