Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03327

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
3,715,258	+		MIT1002_03326	0.36	-1.1
3,715,274	+		MIT1002_03326	0.37	-2.7
3,715,275	-		MIT1002_03326	0.37	-3.0
3,715,276	-		MIT1002_03326	0.37	-0.7
3,715,288	-		MIT1002_03326	0.38	-0.0
3,715,303	-		MIT1002_03326	0.39	-3.9
3,715,307	+		MIT1002_03326	0.40	-1.5
3,715,320	-		MIT1002_03326	0.40	-0.6
3,715,363	+		MIT1002_03326	0.43	-3.2
3,715,434	+		MIT1002_03326	0.48	-0.1
3,715,457	-		MIT1002_03326	0.50	+0.2
3,715,525	+		MIT1002_03326	0.54	+0.0
3,715,530	+		MIT1002_03326	0.54	-1.1
3,715,530	+		MIT1002_03326	0.54	-0.4
3,715,530	+		MIT1002_03326	0.54	+0.0
3,715,530	+		MIT1002_03326	0.54	-0.7
3,715,530	+		MIT1002_03326	0.54	-1.1
3,715,533	-		MIT1002_03326	0.55	-0.9
3,715,538	-		MIT1002_03326	0.55	-0.7
3,715,538	-		MIT1002_03326	0.55	-1.4
3,715,538	-		MIT1002_03326	0.55	-4.0
3,715,538	-		MIT1002_03326	0.55	+0.4
3,715,678	+		MIT1002_03326	0.64	-3.5
3,715,679	-		MIT1002_03326	0.64	-2.3
3,715,679	-		MIT1002_03326	0.64	-0.7
3,715,698	+		MIT1002_03326	0.66	-0.8
3,715,752	-		MIT1002_03326	0.69	+0.8
3,715,752	-		MIT1002_03326	0.69	-1.8
3,715,791	+		MIT1002_03326	0.72	-3.6
3,715,956	-		MIT1002_03326	0.83	-1.0
3,715,964	-		MIT1002_03326	0.83	+0.0
3,715,987	+		MIT1002_03326	0.85	+0.5
3,715,995	-		MIT1002_03326	0.85	-0.5
3,715,999	+		MIT1002_03326	0.86	-1.9
3,715,999	+		MIT1002_03326	0.86	-3.3
3,715,999	+		MIT1002_03326	0.86	-0.4
3,715,999	+		MIT1002_03326	0.86	-1.5
3,715,999	+		MIT1002_03326	0.86	-1.9
3,716,007	-		MIT1002_03326	0.86	-0.2
3,716,007	-		MIT1002_03326	0.86	-3.5
3,716,007	-		MIT1002_03326	0.86	-1.6
3,716,007	-		MIT1002_03326	0.86	+0.2
3,716,007	-		MIT1002_03326	0.86	-0.2
3,716,025	+		MIT1002_03326	0.87	-2.0
3,716,030	+		MIT1002_03326	0.88	-0.5
3,716,080	-				+0.1
3,716,090	-				+0.0
3,716,107	+				-1.8
3,716,143	+				-1.0
3,716,153	+				-0.6
3,716,156	-				-1.5
3,716,158	+				-1.7
3,716,161	-				-0.4
3,716,161	-				-1.5
3,716,161	-				+1.0
3,716,161	-				-0.5
3,716,166	-				+1.2
3,716,196	-				-1.5
3,716,235	+				-2.2
3,716,306	+				-1.5
3,716,336	-		MIT1002_03327	0.12	-0.5
3,716,338	+		MIT1002_03327	0.13	-1.7
3,716,364	+		MIT1002_03327	0.16	-1.7
3,716,384	-		MIT1002_03327	0.18	+1.2
3,716,622	+		MIT1002_03327	0.45	-2.1
3,716,630	-		MIT1002_03327	0.46	-1.1
3,716,668	-		MIT1002_03327	0.50	-1.3
3,716,674	-		MIT1002_03327	0.51	-2.0
3,716,715	+		MIT1002_03327	0.56	-0.4
3,716,852	+		MIT1002_03327	0.71	-3.5
3,716,852	+		MIT1002_03327	0.71	-2.9
3,716,900	-		MIT1002_03327	0.77	-0.4
3,716,915	-		MIT1002_03327	0.78	-3.1
3,716,954	+		MIT1002_03327	0.83	-0.5
3,717,021	-				-2.0
3,717,021	-				-0.3
3,717,122	-				+1.3
3,717,137	+				+0.3
3,717,137	+				+2.3
3,717,140	+				+1.3
3,717,151	+				-0.0
3,717,270	-				-0.2
3,717,270	-				+0.5
3,717,270	-				+0.5
3,717,292	-				-1.6
3,717,354	-				-0.1
3,717,358	+				+0.7
3,717,364	-				-1.0
3,717,364	-				+2.5
3,717,381	-				+0.0
3,717,437	-				+1.0
3,717,437	-				-0.3
3,717,442	-				-2.5
3,717,442	-				+0.5
3,717,474	+		MIT1002_03328	0.11	-0.3
3,717,497	-		MIT1002_03328	0.12	-0.6
3,717,545	-		MIT1002_03328	0.14	-0.7
3,717,565	-		MIT1002_03328	0.15	+1.5
3,717,574	-		MIT1002_03328	0.16	-0.5
3,717,633	+		MIT1002_03328	0.19	-2.9
3,717,674	+		MIT1002_03328	0.21	-1.2
3,717,811	+		MIT1002_03328	0.27	-1.1
3,717,813	+		MIT1002_03328	0.28	+0.6
3,717,813	+		MIT1002_03328	0.28	-0.7
3,717,813	+		MIT1002_03328	0.28	-0.2
3,717,813	+		MIT1002_03328	0.28	-0.0
3,717,813	+		MIT1002_03328	0.28	+0.5
3,717,813	+		MIT1002_03328	0.28	-0.3
3,717,821	-		MIT1002_03328	0.28	-0.8
3,717,821	-		MIT1002_03328	0.28	-0.8
3,717,821	-		MIT1002_03328	0.28	-2.0
3,717,821	-		MIT1002_03328	0.28	-0.0
3,717,906	+		MIT1002_03328	0.32	+1.2
3,717,912	-		MIT1002_03328	0.32	+0.9
3,717,920	+		MIT1002_03328	0.33	+0.3
3,717,937	-		MIT1002_03328	0.34	+0.9
3,717,937	-		MIT1002_03328	0.34	+0.7
3,717,989	-		MIT1002_03328	0.36	-0.5
3,718,026	+		MIT1002_03328	0.38	-0.1
3,718,064	-		MIT1002_03328	0.40	-0.3
3,718,100	-		MIT1002_03328	0.42	+0.1