Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03322

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
3,709,105	+		MIT1002_03321	0.48	-4.2
3,709,105	+		MIT1002_03321	0.48	-0.5
3,709,113	-		MIT1002_03321	0.49	-1.1
3,709,140	-		MIT1002_03321	0.50	-2.5
3,709,147	+		MIT1002_03321	0.51	-2.2
3,709,162	+		MIT1002_03321	0.52	-3.5
3,709,172	-		MIT1002_03321	0.53	-4.5
3,709,258	-		MIT1002_03321	0.58	-3.5
3,709,258	-		MIT1002_03321	0.58	-3.5
3,709,273	+		MIT1002_03321	0.59	-7.3
3,709,349	-		MIT1002_03321	0.64	-4.5
3,709,380	+		MIT1002_03321	0.66	-4.4
3,709,380	+		MIT1002_03321	0.66	-2.3
3,709,380	+		MIT1002_03321	0.66	-5.2
3,709,388	-		MIT1002_03321	0.67	-4.4
3,709,504	-		MIT1002_03321	0.74	-1.7
3,709,522	+		MIT1002_03321	0.76	-1.7
3,709,522	+		MIT1002_03321	0.76	-4.6
3,709,525	-		MIT1002_03321	0.76	-3.2
3,709,611	-		MIT1002_03321	0.81	-2.2
3,709,665	-		MIT1002_03321	0.85	-5.0
3,709,682	-		MIT1002_03321	0.86	-5.3
3,709,687	-		MIT1002_03321	0.86	-3.4
3,709,723	+		MIT1002_03321	0.89	-3.3
3,709,731	-		MIT1002_03321	0.89	+2.2
3,709,794	+				-5.9
3,709,794	+				-4.3
3,709,794	+				-5.7
3,709,795	-				-1.1
3,709,802	-				-3.7
3,709,802	-				-3.6
3,709,802	-				-4.3
3,709,802	-				-1.5
3,709,869	-				-0.8
3,709,877	-				-3.7
3,709,881	+				-3.9
3,709,965	+				-3.6
3,709,975	+				-1.7
3,710,051	+				-0.4
3,710,074	+				-0.4
3,710,089	-				-0.9
3,710,148	-		MIT1002_03322	0.17	-1.0
3,710,162	+		MIT1002_03322	0.19	-0.8
3,710,182	+		MIT1002_03322	0.22	-3.2
3,710,203	-		MIT1002_03322	0.25	-0.8
3,710,281	+		MIT1002_03322	0.36	-1.2
3,710,281	+		MIT1002_03322	0.36	-1.7
3,710,427	+		MIT1002_03322	0.58	-2.9
3,710,427	+		MIT1002_03322	0.58	-2.9
3,710,440	-		MIT1002_03322	0.60	-3.4
3,710,442	+		MIT1002_03322	0.60	-3.4
3,710,660	-				-2.9
3,710,660	-				-0.4
3,710,749	+				-3.6
3,710,749	+				-4.5
3,710,749	+				-5.3
3,710,749	+				-3.9
3,710,757	-				-4.4
3,710,757	-				-4.1
3,710,814	+				-1.8
3,710,817	-				-3.9
3,710,829	-				-4.9
3,710,843	-		MIT1002_03323	0.11	-4.0
3,710,949	-		MIT1002_03323	0.19	-4.1
3,710,966	-		MIT1002_03323	0.20	-3.3
3,711,051	+		MIT1002_03323	0.27	-2.2
3,711,052	+		MIT1002_03323	0.27	-3.0
3,711,053	+		MIT1002_03323	0.27	-4.5
3,711,063	+		MIT1002_03323	0.28	-5.0
3,711,063	+		MIT1002_03323	0.28	-4.0
3,711,112	+		MIT1002_03323	0.32	-1.7
3,711,194	+		MIT1002_03323	0.39	-4.1
3,711,218	+		MIT1002_03323	0.40	-4.1
3,711,226	-		MIT1002_03323	0.41	-3.3
3,711,266	-		MIT1002_03323	0.44	-3.2
3,711,418	+		MIT1002_03323	0.56	-1.3
3,711,517	+		MIT1002_03323	0.64	-3.8
3,711,524	+		MIT1002_03323	0.65	-1.0
3,711,525	-		MIT1002_03323	0.65	-0.8
3,711,525	-		MIT1002_03323	0.65	-3.5
3,711,525	-		MIT1002_03323	0.65	-2.6
3,711,562	+		MIT1002_03323	0.68	-4.7
3,711,562	+		MIT1002_03323	0.68	-3.3
3,711,562	+		MIT1002_03323	0.68	-4.1
3,711,622	+		MIT1002_03323	0.73	-2.4
3,711,648	-		MIT1002_03323	0.75	-5.2
3,711,677	+		MIT1002_03323	0.77	-0.5
3,711,684	+		MIT1002_03323	0.77	-3.6
3,711,685	-		MIT1002_03323	0.78	-4.3
3,711,691	+		MIT1002_03323	0.78	-2.2
3,711,708	-		MIT1002_03323	0.79	-3.8