Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03108

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
3,462,446	+				-1.5
3,462,455	+				+1.6
3,462,579	-				+1.6
3,462,594	+				+0.8
3,462,594	+				+0.7
3,462,661	-		MIT1002_03108	0.16	-1.5
3,462,663	+		MIT1002_03108	0.17	+1.2
3,462,689	+		MIT1002_03108	0.23	+0.0
3,462,689	+		MIT1002_03108	0.23	-0.2
3,462,689	+		MIT1002_03108	0.23	+0.3
3,462,697	-		MIT1002_03108	0.25	-0.3
3,462,756	+		MIT1002_03108	0.39	-0.2
3,462,827	+		MIT1002_03108	0.57	-0.0
3,462,835	+		MIT1002_03108	0.59	-2.5
3,462,842	+		MIT1002_03108	0.60	-0.4
3,462,850	-		MIT1002_03108	0.62	-0.2
3,462,872	-		MIT1002_03108	0.68	+0.5
3,462,967	-				+1.5
3,463,093	-				+0.3
3,463,093	-				+1.3
3,463,116	-				-1.0
3,463,117	-				-0.5
3,463,135	+				+1.2
3,463,179	-				-0.9
3,463,226	-				-1.1
3,463,226	-				+0.9
3,463,254	-				-1.8
3,463,416	-				-0.9
3,463,556	+		MIT1002_03109	0.21	-0.9
3,463,994	+		MIT1002_03109	0.57	-1.6
3,464,002	-		MIT1002_03109	0.58	-2.0