Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02909

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
3,231,945	+		MIT1002_02908	0.33	-3.6
3,232,010	-		MIT1002_02908	0.38	-0.5
3,232,079	-		MIT1002_02908	0.43	-0.9
3,232,143	-		MIT1002_02908	0.47	-0.2
3,232,271	-		MIT1002_02908	0.56	-0.4
3,232,311	+		MIT1002_02908	0.58	-0.1
3,232,593	-		MIT1002_02908	0.78	-1.0
3,232,619	+		MIT1002_02908	0.79	+0.2
3,232,625	-		MIT1002_02908	0.80	-0.4
3,232,658	+		MIT1002_02908	0.82	+0.9
3,232,685	-		MIT1002_02908	0.84	-1.3
3,232,708	-		MIT1002_02908	0.85	-1.1
3,232,713	+		MIT1002_02908	0.86	-0.9
3,232,812	+				-0.3
3,232,820	-				+0.8
3,232,861	+				-0.7
3,232,863	+				+0.2
3,232,915	+				+1.1
3,232,937	+				-0.3
3,233,035	+				-1.0
3,233,089	+				+0.5
3,233,089	+				-0.8
3,233,096	-				-0.2
3,233,097	-				-1.1
3,233,097	-				-1.3
3,233,162	+		MIT1002_02909	0.13	-0.9
3,233,165	-		MIT1002_02909	0.14	-0.0
3,233,181	+		MIT1002_02909	0.15	-0.4
3,233,186	+		MIT1002_02909	0.15	+0.5
3,233,194	-		MIT1002_02909	0.15	-1.1
3,233,194	-		MIT1002_02909	0.15	-0.4
3,233,194	-		MIT1002_02909	0.15	-0.5
3,233,268	+		MIT1002_02909	0.20	+0.4
3,233,276	-		MIT1002_02909	0.20	-0.8
3,233,333	+		MIT1002_02909	0.24	-0.6
3,233,372	+		MIT1002_02909	0.26	-0.4
3,233,480	+		MIT1002_02909	0.33	-0.2
3,233,481	+		MIT1002_02909	0.33	-1.4
3,233,487	+		MIT1002_02909	0.33	+0.7
3,233,487	+		MIT1002_02909	0.33	+0.6
3,233,492	+		MIT1002_02909	0.33	-1.9
3,233,492	+		MIT1002_02909	0.33	-0.5
3,233,500	-		MIT1002_02909	0.34	-1.8
3,233,526	-		MIT1002_02909	0.35	+0.9
3,233,550	+		MIT1002_02909	0.37	-0.7
3,233,777	-		MIT1002_02909	0.51	-0.6
3,233,785	+		MIT1002_02909	0.51	-0.5
3,233,852	-		MIT1002_02909	0.55	+0.5
3,233,902	-		MIT1002_02909	0.58	-0.9
3,233,902	-		MIT1002_02909	0.58	-0.1
3,233,925	+		MIT1002_02909	0.60	-2.2
3,233,938	-		MIT1002_02909	0.60	-0.8
3,233,938	-		MIT1002_02909	0.60	-0.3
3,233,938	-		MIT1002_02909	0.60	-0.8
3,233,957	-		MIT1002_02909	0.62	+0.5
3,233,982	-		MIT1002_02909	0.63	+1.1
3,233,984	+		MIT1002_02909	0.63	-0.5
3,233,984	+		MIT1002_02909	0.63	-0.7
3,233,984	+		MIT1002_02909	0.63	-1.2
3,233,985	+		MIT1002_02909	0.63	-0.1
3,233,992	-		MIT1002_02909	0.64	-0.7
3,233,992	-		MIT1002_02909	0.64	-2.1
3,234,119	-		MIT1002_02909	0.71	+0.4
3,234,125	-		MIT1002_02909	0.72	-1.7
3,234,126	+		MIT1002_02909	0.72	-0.6
3,234,200	-		MIT1002_02909	0.76	+0.4
3,234,200	-		MIT1002_02909	0.76	-1.4
3,234,200	-		MIT1002_02909	0.76	+2.0
3,234,258	-		MIT1002_02909	0.80	-0.1
3,234,283	+		MIT1002_02909	0.81	-0.4
3,234,283	-		MIT1002_02909	0.81	-0.1
3,234,323	+		MIT1002_02909	0.84	-1.2
3,234,385	+		MIT1002_02909	0.87	+0.6
3,234,483	+				+0.2
3,234,510	+				-0.8
3,234,520	+				-1.0
3,234,528	-				-0.5
3,234,702	+				-0.6
3,234,769	+				+1.3
3,234,775	-				+0.6
3,234,775	-				+0.3
3,234,775	-				-0.3
3,234,777	-				+0.0
3,234,809	-				-0.0
3,234,810	+				-2.5
3,234,811	+				+0.6
3,234,839	-				-1.3
3,234,844	-				-0.0
3,234,859	-				+0.6
3,234,870	-				-0.3
3,234,877	-				+1.6
3,234,968	+		MIT1002_02910	0.17	+1.0
3,235,110	-		MIT1002_02910	0.28	+1.2
3,235,166	+		MIT1002_02910	0.33	-0.6
3,235,167	+		MIT1002_02910	0.33	-0.1
3,235,167	+		MIT1002_02910	0.33	-0.4
3,235,167	+		MIT1002_02910	0.33	-0.9
3,235,175	-		MIT1002_02910	0.34	+1.7
3,235,295	+		MIT1002_02910	0.44	-0.1
3,235,396	+		MIT1002_02910	0.52	+0.1
3,235,406	-		MIT1002_02910	0.53	+0.6
3,235,411	+		MIT1002_02910	0.53	-0.1
3,235,522	+		MIT1002_02910	0.62	+0.1