Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02836

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
3,145,181	-				-0.5
3,145,195	+				+0.4
3,145,295	-		MIT1002_02836	0.14	+0.0
3,145,295	-		MIT1002_02836	0.14	+0.9
3,145,375	-		MIT1002_02836	0.21	-1.6
3,145,375	-		MIT1002_02836	0.21	+0.3
3,145,375	-		MIT1002_02836	0.21	-1.9
3,145,375	-		MIT1002_02836	0.21	-1.8
3,145,416	+		MIT1002_02836	0.25	+1.3
3,145,453	-		MIT1002_02836	0.28	+0.4
3,145,619	-		MIT1002_02836	0.43	-0.9
3,145,619	-		MIT1002_02836	0.43	+1.1
3,145,683	-		MIT1002_02836	0.48	-1.5
3,145,717	+		MIT1002_02836	0.51	+0.6
3,145,740	-		MIT1002_02836	0.53	-0.2
3,145,754	-		MIT1002_02836	0.54	-1.2
3,145,826	-		MIT1002_02836	0.61	+0.3
3,145,968	+		MIT1002_02836	0.73	-0.8
3,145,974	-		MIT1002_02836	0.74	+0.0
3,146,125	-		MIT1002_02836	0.87	-0.0
3,146,149	-		MIT1002_02836	0.89	-0.6
3,146,151	+		MIT1002_02836	0.89	+0.0
3,146,154	-		MIT1002_02836	0.90	-1.1
3,146,180	-				+1.7
3,146,207	+				+0.3
3,146,217	+				+0.8
3,146,217	+				+0.0
3,146,226	-				+0.3
3,146,296	-				-1.9
3,146,298	+				-2.0
3,146,306	-				+0.2
3,146,306	-				-1.0
3,146,511	-		MIT1002_02837	0.26	+0.2
3,146,524	+		MIT1002_02837	0.27	+0.1
3,146,532	-		MIT1002_02837	0.28	+0.3
3,146,534	+		MIT1002_02837	0.29	+0.2
3,146,544	+		MIT1002_02837	0.30	-0.0
3,146,552	-		MIT1002_02837	0.31	-0.2
3,146,552	-		MIT1002_02837	0.31	-0.5
3,146,552	-		MIT1002_02837	0.31	+0.6
3,146,626	+		MIT1002_02837	0.39	-0.7
3,146,634	-		MIT1002_02837	0.39	-0.4
3,146,675	-		MIT1002_02837	0.44	+0.8
3,146,756	+		MIT1002_02837	0.53	+0.2
3,146,768	+		MIT1002_02837	0.54	+0.2
3,146,891	+		MIT1002_02837	0.67	-0.7
3,146,910	+		MIT1002_02837	0.69	-1.2
3,146,910	+		MIT1002_02837	0.69	+0.7
3,146,918	-		MIT1002_02837	0.70	+1.1
3,146,920	+		MIT1002_02837	0.70	+1.1
3,146,934	+		MIT1002_02837	0.72	+0.3
3,146,942	-		MIT1002_02837	0.73	-0.0
3,146,952	-		MIT1002_02837	0.74	-0.6
3,147,057	-		MIT1002_02837	0.85	-0.4
3,147,060	+		MIT1002_02837	0.85	+1.2
3,147,081	+		MIT1002_02837	0.88	-0.7
3,147,141	+				+0.3
3,147,141	+				+0.4
3,147,153	+				+0.3
3,147,161	-				-2.9
3,147,205	-				-2.7
3,147,205	-				-0.4